Ginsentides : cysteine and glycine-rich peptides from the ginseng family with unusual disulfide connectivity

Ginseng, a popular and valuable traditional medicine, has been used for centuries to maintain health and treat disease. Here we report the discovery and characterization of ginsentides, a novel family of cysteine and glycine-rich peptides derived from the three most widely-used ginseng species: Pana...

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Main Authors: Tam, James P., Loo, Shining, Wang, Shujing, Yang, Daiwen, Kam, Antony, Nguyen, Giang Kien Truc
Other Authors: School of Biological Sciences
Format: Article
Language:English
Published: 2019
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Online Access:https://hdl.handle.net/10356/81252
http://hdl.handle.net/10220/47447
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Institution: Nanyang Technological University
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spelling sg-ntu-dr.10356-812522023-02-28T16:58:29Z Ginsentides : cysteine and glycine-rich peptides from the ginseng family with unusual disulfide connectivity Tam, James P. Loo, Shining Wang, Shujing Yang, Daiwen Kam, Antony Nguyen, Giang Kien Truc School of Biological Sciences DRNTU::Science::Biological sciences Ginseng Disulfide Connectivity Ginseng, a popular and valuable traditional medicine, has been used for centuries to maintain health and treat disease. Here we report the discovery and characterization of ginsentides, a novel family of cysteine and glycine-rich peptides derived from the three most widely-used ginseng species: Panax ginseng, Panax quinquefolius, and Panax notoginseng. Using proteomic and transcriptomic methods, we identified 14 ginsentides, TP1-TP14 which consist of 31–33 amino acids and whose expression profiles are species- and tissues-dependent. Ginsentides have an eight-cysteine motif typical of the eight-cysteine-hevein-like peptides (8C-HLP) commonly found in medicinal herbs, but lack a chitin-binding domain. Transcriptomic analysis showed that the three-domain biosynthetic precursors of ginsentides differ from known 8C-HLP precursors in architecture and the absence of a C-terminal protein-cargo domain. A database search revealed an additional 50 ginsentide-like precursors from both gymnosperms and angiosperms. Disulfide mapping and structure determination of the ginsentide TP1 revealed a novel disulfide connectivity that differs from the 8C-HLPs. The structure of ginsentide TP1 is highly compact, with the N- and C-termini topologically fixed by disulfide bonds to form a pseudocyclic structure that confers resistance to heat, proteolysis, and acid and serum-mediated degradation. Together, our results expand the chemical space of natural products found in ginseng and highlight the occurrence, distribution, disulfide connectivity, and precursor architectures of cysteine- and glycine-rich ginsentides as a class of novel non-chitin-binding, non-cargo-carrying 8C-HLPs. MOE (Min. of Education, S’pore) Published version 2019-01-11T06:34:30Z 2019-12-06T14:26:35Z 2019-01-11T06:34:30Z 2019-12-06T14:26:35Z 2018 Journal Article Tam, J. P., Nguyen, G. K. T., Loo, S., Wang, S., Yang, D., & Kam, A. (2018). Ginsentides : cysteine and glycine-rich peptides from the ginseng family with unusual disulfide connectivity. Scientific Reports, 8(1), 16201-. doi:10.1038/s41598-018-33894-x https://hdl.handle.net/10356/81252 http://hdl.handle.net/10220/47447 10.1038/s41598-018-33894-x en Scientific Reports © 2018 The Author(s). This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. 15 p. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic DRNTU::Science::Biological sciences
Ginseng
Disulfide Connectivity
spellingShingle DRNTU::Science::Biological sciences
Ginseng
Disulfide Connectivity
Tam, James P.
Loo, Shining
Wang, Shujing
Yang, Daiwen
Kam, Antony
Nguyen, Giang Kien Truc
Ginsentides : cysteine and glycine-rich peptides from the ginseng family with unusual disulfide connectivity
description Ginseng, a popular and valuable traditional medicine, has been used for centuries to maintain health and treat disease. Here we report the discovery and characterization of ginsentides, a novel family of cysteine and glycine-rich peptides derived from the three most widely-used ginseng species: Panax ginseng, Panax quinquefolius, and Panax notoginseng. Using proteomic and transcriptomic methods, we identified 14 ginsentides, TP1-TP14 which consist of 31–33 amino acids and whose expression profiles are species- and tissues-dependent. Ginsentides have an eight-cysteine motif typical of the eight-cysteine-hevein-like peptides (8C-HLP) commonly found in medicinal herbs, but lack a chitin-binding domain. Transcriptomic analysis showed that the three-domain biosynthetic precursors of ginsentides differ from known 8C-HLP precursors in architecture and the absence of a C-terminal protein-cargo domain. A database search revealed an additional 50 ginsentide-like precursors from both gymnosperms and angiosperms. Disulfide mapping and structure determination of the ginsentide TP1 revealed a novel disulfide connectivity that differs from the 8C-HLPs. The structure of ginsentide TP1 is highly compact, with the N- and C-termini topologically fixed by disulfide bonds to form a pseudocyclic structure that confers resistance to heat, proteolysis, and acid and serum-mediated degradation. Together, our results expand the chemical space of natural products found in ginseng and highlight the occurrence, distribution, disulfide connectivity, and precursor architectures of cysteine- and glycine-rich ginsentides as a class of novel non-chitin-binding, non-cargo-carrying 8C-HLPs.
author2 School of Biological Sciences
author_facet School of Biological Sciences
Tam, James P.
Loo, Shining
Wang, Shujing
Yang, Daiwen
Kam, Antony
Nguyen, Giang Kien Truc
format Article
author Tam, James P.
Loo, Shining
Wang, Shujing
Yang, Daiwen
Kam, Antony
Nguyen, Giang Kien Truc
author_sort Tam, James P.
title Ginsentides : cysteine and glycine-rich peptides from the ginseng family with unusual disulfide connectivity
title_short Ginsentides : cysteine and glycine-rich peptides from the ginseng family with unusual disulfide connectivity
title_full Ginsentides : cysteine and glycine-rich peptides from the ginseng family with unusual disulfide connectivity
title_fullStr Ginsentides : cysteine and glycine-rich peptides from the ginseng family with unusual disulfide connectivity
title_full_unstemmed Ginsentides : cysteine and glycine-rich peptides from the ginseng family with unusual disulfide connectivity
title_sort ginsentides : cysteine and glycine-rich peptides from the ginseng family with unusual disulfide connectivity
publishDate 2019
url https://hdl.handle.net/10356/81252
http://hdl.handle.net/10220/47447
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