Structure of the GTP Form of Elongation Factor 4 (EF4) Bound to the Ribosome

Elongation factor 4 (EF4) is a member of the family of ribosome-dependent translational GTPase factors, along with elongation factor G and BPI-inducible protein A. Although EF4 is highly conserved in bacterial, mitochondrial, and chloroplast genomes, its exact biological function remains controversi...

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Main Authors: Kumar, Veerendra, Ero, Rya, Ahmed, Tofayel, Goh, Kwok Jian, Zhan, Yin, Bhushan, Shashi, Gao, Yong-Gui
Other Authors: School of Biological Sciences
Format: Article
Language:English
Published: 2017
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Online Access:https://hdl.handle.net/10356/81842
http://hdl.handle.net/10220/43494
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Institution: Nanyang Technological University
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spelling sg-ntu-dr.10356-818422023-02-28T16:58:29Z Structure of the GTP Form of Elongation Factor 4 (EF4) Bound to the Ribosome Kumar, Veerendra Ero, Rya Ahmed, Tofayel Goh, Kwok Jian Zhan, Yin Bhushan, Shashi Gao, Yong-Gui School of Biological Sciences Institute of Structural Biology Cryo-EM Ribosome structure Elongation factor 4 (EF4) is a member of the family of ribosome-dependent translational GTPase factors, along with elongation factor G and BPI-inducible protein A. Although EF4 is highly conserved in bacterial, mitochondrial, and chloroplast genomes, its exact biological function remains controversial. Here we present the cryo-EM reconstitution of the GTP form of EF4 bound to the ribosome with P and E site tRNAs at 3.8-Å resolution. Interestingly, our structure reveals an unrotated ribosome rather than a clockwise-rotated ribosome, as observed in the presence of EF4-GDP and P site tRNA. In addition, we also observed a counterclockwise-rotated form of the above complex at 5.7-Å resolution. Taken together, our results shed light on the interactions formed between EF4, the ribosome, and the P site tRNA and illuminate the GTPase activation mechanism at previously unresolved detail. NRF (Natl Research Foundation, S’pore) MOE (Min. of Education, S’pore) Accepted version 2017-07-31T02:56:37Z 2019-12-06T14:41:21Z 2017-07-31T02:56:37Z 2019-12-06T14:41:21Z 2016 Journal Article Kumar, V., Ero, R., Ahmed, T., Goh, K. J., Zhan, Y., Bhushan, S., et al. (2016). Structure of the GTP Form of Elongation Factor 4 (EF4) Bound to the Ribosome. The Journal of Biological Chemistry, 291(25), 12943-12950. 0021-9258 https://hdl.handle.net/10356/81842 http://hdl.handle.net/10220/43494 10.1074/jbc.M116.725945 27137929 en The Journal of Biological Chemistry © 2016 The American Society for Biochemistry and Molecular Biology (ASBMB). This is the author created version of a work that has been peer reviewed and accepted for publication by The Journal of Biological Chemistry, The American Society for Biochemistry and Molecular Biology. It incorporates referee’s comments but changes resulting from the publishing process, such as copyediting, structural formatting, may not be reflected in this document. The published version is available at: [http://dx.doi.org/10.1074/jbc.M116.725945]. 17 p. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic Cryo-EM
Ribosome structure
spellingShingle Cryo-EM
Ribosome structure
Kumar, Veerendra
Ero, Rya
Ahmed, Tofayel
Goh, Kwok Jian
Zhan, Yin
Bhushan, Shashi
Gao, Yong-Gui
Structure of the GTP Form of Elongation Factor 4 (EF4) Bound to the Ribosome
description Elongation factor 4 (EF4) is a member of the family of ribosome-dependent translational GTPase factors, along with elongation factor G and BPI-inducible protein A. Although EF4 is highly conserved in bacterial, mitochondrial, and chloroplast genomes, its exact biological function remains controversial. Here we present the cryo-EM reconstitution of the GTP form of EF4 bound to the ribosome with P and E site tRNAs at 3.8-Å resolution. Interestingly, our structure reveals an unrotated ribosome rather than a clockwise-rotated ribosome, as observed in the presence of EF4-GDP and P site tRNA. In addition, we also observed a counterclockwise-rotated form of the above complex at 5.7-Å resolution. Taken together, our results shed light on the interactions formed between EF4, the ribosome, and the P site tRNA and illuminate the GTPase activation mechanism at previously unresolved detail.
author2 School of Biological Sciences
author_facet School of Biological Sciences
Kumar, Veerendra
Ero, Rya
Ahmed, Tofayel
Goh, Kwok Jian
Zhan, Yin
Bhushan, Shashi
Gao, Yong-Gui
format Article
author Kumar, Veerendra
Ero, Rya
Ahmed, Tofayel
Goh, Kwok Jian
Zhan, Yin
Bhushan, Shashi
Gao, Yong-Gui
author_sort Kumar, Veerendra
title Structure of the GTP Form of Elongation Factor 4 (EF4) Bound to the Ribosome
title_short Structure of the GTP Form of Elongation Factor 4 (EF4) Bound to the Ribosome
title_full Structure of the GTP Form of Elongation Factor 4 (EF4) Bound to the Ribosome
title_fullStr Structure of the GTP Form of Elongation Factor 4 (EF4) Bound to the Ribosome
title_full_unstemmed Structure of the GTP Form of Elongation Factor 4 (EF4) Bound to the Ribosome
title_sort structure of the gtp form of elongation factor 4 (ef4) bound to the ribosome
publishDate 2017
url https://hdl.handle.net/10356/81842
http://hdl.handle.net/10220/43494
_version_ 1759854180145561600