In Situ Mapping of the Mechanical Properties of Biofilms by Particle-tracking Microrheology

Bacterial cells are able to form surface-attached biofilm communities known as biofilms by encasing themselves in extracellular polymeric substances (EPS). The EPS serves as a physical and protective scaffold that houses the bacterial cells and consists of a variety of materials that includes protei...

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Main Authors: Chew, Su Chuen, Kjelleberg, Staffan, Yang, Liang, Rice, Scott A.
Other Authors: School of Biological Sciences
Format: Article
Language:English
Published: 2016
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Online Access:https://hdl.handle.net/10356/82019
http://hdl.handle.net/10220/39789
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Institution: Nanyang Technological University
Language: English
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spelling sg-ntu-dr.10356-820192022-02-16T16:26:25Z In Situ Mapping of the Mechanical Properties of Biofilms by Particle-tracking Microrheology Chew, Su Chuen Kjelleberg, Staffan Yang, Liang Rice, Scott A. School of Biological Sciences Interdisciplinary Graduate School (IGS) Singapore Centre for Environmental Life Sciences Engineering Matrix Bacteria Issue 106 Biofilm Particle-tracking microrheology Microscopy Exopolysaccharides Bioengineering Bacterial cells are able to form surface-attached biofilm communities known as biofilms by encasing themselves in extracellular polymeric substances (EPS). The EPS serves as a physical and protective scaffold that houses the bacterial cells and consists of a variety of materials that includes proteins, exopolysaccharides and DNA. The composition of the EPS may change, which remodels the mechanic properties of the biofilm to further develop or support alternative biofilm structures, such as streamers, as a response to environmental cues. Despite this, there are little quantitative descriptions on how EPS components contribute to the mechanical properties and function of biofilms. Rheology, the study of the flow of matter, is of particular relevance to biofilms as many biofilms grow in flow conditions and are constantly exposed to shear stress. It also provides measurement and insight on the spreading of the biofilm on a surface. Here, particle-tracking microrheology is used to examine the viscoelasticity and effective crosslinking roles of different matrix components in various parts of the biofilm during development. This approach allows researchers to measure mechanic properties of biofilms at the micro-scale, which might provide useful information for controlling and engineering biofilms. NRF (Natl Research Foundation, S’pore) MOE (Min. of Education, S’pore) Published version 2016-01-26T04:14:39Z 2019-12-06T14:44:49Z 2016-01-26T04:14:39Z 2019-12-06T14:44:49Z 2015 Journal Article Chew, S.C., Rice, S.A., Kjelleberg, S., & Yang, L. (2015) In Situ Mapping of the Mechanical Properties of Biofilms by Particle-tracking Microrheology. Journal of Visualized Experiments, (106), e53093-. https://hdl.handle.net/10356/82019 http://hdl.handle.net/10220/39789 10.3791/53093 26709625 en Journal of Visualized Experiments © 2015 Journal of Visualized Experiments. This paper was published in Journal of Visualized Experiments and is made available as an electronic reprint (preprint) with permission of Journal of Visualized Experiments. The published version is available at: [http://dx.doi.org/10.3791/53093]. One print or electronic copy may be made for personal use only. Systematic or multiple reproduction, distribution to multiple locations via electronic or other means, duplication of any material in this paper for a fee or for commercial purposes, or modification of the content of the paper is prohibited and is subject to penalties under law. 8 p. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic Matrix
Bacteria
Issue 106
Biofilm
Particle-tracking microrheology
Microscopy
Exopolysaccharides
Bioengineering
spellingShingle Matrix
Bacteria
Issue 106
Biofilm
Particle-tracking microrheology
Microscopy
Exopolysaccharides
Bioengineering
Chew, Su Chuen
Kjelleberg, Staffan
Yang, Liang
Rice, Scott A.
In Situ Mapping of the Mechanical Properties of Biofilms by Particle-tracking Microrheology
description Bacterial cells are able to form surface-attached biofilm communities known as biofilms by encasing themselves in extracellular polymeric substances (EPS). The EPS serves as a physical and protective scaffold that houses the bacterial cells and consists of a variety of materials that includes proteins, exopolysaccharides and DNA. The composition of the EPS may change, which remodels the mechanic properties of the biofilm to further develop or support alternative biofilm structures, such as streamers, as a response to environmental cues. Despite this, there are little quantitative descriptions on how EPS components contribute to the mechanical properties and function of biofilms. Rheology, the study of the flow of matter, is of particular relevance to biofilms as many biofilms grow in flow conditions and are constantly exposed to shear stress. It also provides measurement and insight on the spreading of the biofilm on a surface. Here, particle-tracking microrheology is used to examine the viscoelasticity and effective crosslinking roles of different matrix components in various parts of the biofilm during development. This approach allows researchers to measure mechanic properties of biofilms at the micro-scale, which might provide useful information for controlling and engineering biofilms.
author2 School of Biological Sciences
author_facet School of Biological Sciences
Chew, Su Chuen
Kjelleberg, Staffan
Yang, Liang
Rice, Scott A.
format Article
author Chew, Su Chuen
Kjelleberg, Staffan
Yang, Liang
Rice, Scott A.
author_sort Chew, Su Chuen
title In Situ Mapping of the Mechanical Properties of Biofilms by Particle-tracking Microrheology
title_short In Situ Mapping of the Mechanical Properties of Biofilms by Particle-tracking Microrheology
title_full In Situ Mapping of the Mechanical Properties of Biofilms by Particle-tracking Microrheology
title_fullStr In Situ Mapping of the Mechanical Properties of Biofilms by Particle-tracking Microrheology
title_full_unstemmed In Situ Mapping of the Mechanical Properties of Biofilms by Particle-tracking Microrheology
title_sort in situ mapping of the mechanical properties of biofilms by particle-tracking microrheology
publishDate 2016
url https://hdl.handle.net/10356/82019
http://hdl.handle.net/10220/39789
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