SEECN : simulating complex systems using dynamic complex networks

Multiscale, multiphysics systems are too complex for traditional mathematical modeling and require numerical simulation, yet such systems arise everywhere from modeling the immune system and protein interaction to epidemic spread in a human population. Unfortunately, at present researchers create th...

وصف كامل

محفوظ في:
التفاصيل البيبلوغرافية
المؤلفون الرئيسيون: Quax, Rick., Bader, David A., Sloot, Peter M. A.
مؤلفون آخرون: School of Computer Engineering
التنسيق: مقال
اللغة:English
منشور في: 2013
الوصول للمادة أونلاين:https://hdl.handle.net/10356/84327
http://hdl.handle.net/10220/10128
الوسوم: إضافة وسم
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المؤسسة: Nanyang Technological University
اللغة: English
الوصف
الملخص:Multiscale, multiphysics systems are too complex for traditional mathematical modeling and require numerical simulation, yet such systems arise everywhere from modeling the immune system and protein interaction to epidemic spread in a human population. Unfortunately, at present researchers create their own ad hoc programs for their particular study. To address this problem we present the simulator for efficient evolution on complex networks (SEECN), an expressive simulator of complex systems that optimizes for both single-core and parallel performance. In SEECN, a complex network represents the system where the nodes and edges have specified properties that dictate the dynamics of the network over time. Our application is a detailed model of HIV spread among men who have sex with men and serves to show the simulator's expressiveness and to evaluate its performance.