Buffalo nasal odorant-binding protein (bunOBP) and its structural evaluation with putative pheromones

Pheromones are odoriferous volatile chemical cues produced by animals for communication among conspecifics so as to regulate their social behaviors. In general, the odor compounds are recognized by receptors in the nasal cavity. Odorant-binding protein (OBP), a lipocalin family protein, mediates the...

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Main Authors: Muthukumar, Subramanian, Rajesh, Durairaj, Selvam, Ramu Muthu, Saibaba, Ganesan, Suvaithenamudhan, Suvaiyarasan, Padmanabhan, Parasuraman, Gulyas, Balazs, Archunan, Govindaraju, Mohammad Abdulkader Akbarsha
Other Authors: Lee Kong Chian School of Medicine (LKCMedicine)
Format: Article
Language:English
Published: 2018
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Online Access:https://hdl.handle.net/10356/86860
http://hdl.handle.net/10220/45329
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Institution: Nanyang Technological University
Language: English
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spelling sg-ntu-dr.10356-868602020-11-01T05:27:04Z Buffalo nasal odorant-binding protein (bunOBP) and its structural evaluation with putative pheromones Muthukumar, Subramanian Rajesh, Durairaj Selvam, Ramu Muthu Saibaba, Ganesan Suvaithenamudhan, Suvaiyarasan Padmanabhan, Parasuraman Gulyas, Balazs Archunan, Govindaraju Mohammad Abdulkader Akbarsha Lee Kong Chian School of Medicine (LKCMedicine) Odorant-binding Protein (OBP) Putative Pheromones Pheromones are odoriferous volatile chemical cues produced by animals for communication among conspecifics so as to regulate their social behaviors. In general, the odor compounds are recognized by receptors in the nasal cavity. Odorant-binding protein (OBP), a lipocalin family protein, mediates the air-borne odor cues to nasal receptors through nasal mucus. The presence of OBP in several mammalian species is well documented but to-date there is no report of a nasal OBP in buffalo. Hence, the present study was undertaken to investigate if OBP is present in buffalo nasal mucus. Uni- and two-dimensional gel electrophoresis of the nasal mucus suggested the presence of OBP, which was confirmed using mass spectrometry. In silico homology model of the OBP was generated and its structural similarity with other mammalian OBPs was assessed. Finally, molecular-docking and -dynamics simulations analysis revealed the efficiency of buffalo nasal OBP (bunOBP) to bind with buffalo pheromones as well as other reported chemical cues. Taken together, the occurrence of nasal OBP in buffalo and its putative role in odor binding are reported for the first time. The potential association of this protein with estrus-specific volatiles could be taken to advantage for non-invasive detection of estrus in buffaloes. MOE (Min. of Education, S’pore) Published version 2018-07-27T07:57:53Z 2019-12-06T16:30:23Z 2018-07-27T07:57:53Z 2019-12-06T16:30:23Z 2018 Journal Article Muthukumar, S., Rajesh, D., Selvam, R. M., Saibaba, G., Suvaithenamudhan, S., Akbarsha, M. A., et al. (2018). Buffalo nasal odorant-binding protein (bunOBP) and its structural evaluation with putative pheromones. Scientific Reports, 8(1), 9323-. 2045-2322 https://hdl.handle.net/10356/86860 http://hdl.handle.net/10220/45329 10.1038/s41598-018-27550-7 en Scientific Reports © 2018 The Author(s) (Nature Publishing Group). This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. 14 p. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic Odorant-binding Protein (OBP)
Putative Pheromones
spellingShingle Odorant-binding Protein (OBP)
Putative Pheromones
Muthukumar, Subramanian
Rajesh, Durairaj
Selvam, Ramu Muthu
Saibaba, Ganesan
Suvaithenamudhan, Suvaiyarasan
Padmanabhan, Parasuraman
Gulyas, Balazs
Archunan, Govindaraju
Mohammad Abdulkader Akbarsha
Buffalo nasal odorant-binding protein (bunOBP) and its structural evaluation with putative pheromones
description Pheromones are odoriferous volatile chemical cues produced by animals for communication among conspecifics so as to regulate their social behaviors. In general, the odor compounds are recognized by receptors in the nasal cavity. Odorant-binding protein (OBP), a lipocalin family protein, mediates the air-borne odor cues to nasal receptors through nasal mucus. The presence of OBP in several mammalian species is well documented but to-date there is no report of a nasal OBP in buffalo. Hence, the present study was undertaken to investigate if OBP is present in buffalo nasal mucus. Uni- and two-dimensional gel electrophoresis of the nasal mucus suggested the presence of OBP, which was confirmed using mass spectrometry. In silico homology model of the OBP was generated and its structural similarity with other mammalian OBPs was assessed. Finally, molecular-docking and -dynamics simulations analysis revealed the efficiency of buffalo nasal OBP (bunOBP) to bind with buffalo pheromones as well as other reported chemical cues. Taken together, the occurrence of nasal OBP in buffalo and its putative role in odor binding are reported for the first time. The potential association of this protein with estrus-specific volatiles could be taken to advantage for non-invasive detection of estrus in buffaloes.
author2 Lee Kong Chian School of Medicine (LKCMedicine)
author_facet Lee Kong Chian School of Medicine (LKCMedicine)
Muthukumar, Subramanian
Rajesh, Durairaj
Selvam, Ramu Muthu
Saibaba, Ganesan
Suvaithenamudhan, Suvaiyarasan
Padmanabhan, Parasuraman
Gulyas, Balazs
Archunan, Govindaraju
Mohammad Abdulkader Akbarsha
format Article
author Muthukumar, Subramanian
Rajesh, Durairaj
Selvam, Ramu Muthu
Saibaba, Ganesan
Suvaithenamudhan, Suvaiyarasan
Padmanabhan, Parasuraman
Gulyas, Balazs
Archunan, Govindaraju
Mohammad Abdulkader Akbarsha
author_sort Muthukumar, Subramanian
title Buffalo nasal odorant-binding protein (bunOBP) and its structural evaluation with putative pheromones
title_short Buffalo nasal odorant-binding protein (bunOBP) and its structural evaluation with putative pheromones
title_full Buffalo nasal odorant-binding protein (bunOBP) and its structural evaluation with putative pheromones
title_fullStr Buffalo nasal odorant-binding protein (bunOBP) and its structural evaluation with putative pheromones
title_full_unstemmed Buffalo nasal odorant-binding protein (bunOBP) and its structural evaluation with putative pheromones
title_sort buffalo nasal odorant-binding protein (bunobp) and its structural evaluation with putative pheromones
publishDate 2018
url https://hdl.handle.net/10356/86860
http://hdl.handle.net/10220/45329
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