Pairwise alignment of DNA sequence using hypercomplex number representation

A new set of DNA base-nucleic acid codes and their hypercomplex number representation have been introduced for taking the probability of each nucleotide into full account. A new scoring system has been proposed to suit the hypercomplex number representation of the DNA base-nucleic acid codes and inc...

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Main Authors: Shu, Jian Jun, Ouw, Li Shan
Other Authors: School of Mechanical and Aerospace Engineering
Format: Conference or Workshop Item
Language:English
Published: 2011
Subjects:
Online Access:https://hdl.handle.net/10356/94066
http://hdl.handle.net/10220/7307
http://www.epsmso.gr/all_conf_index/abstracts/scce04_104.pdf
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Institution: Nanyang Technological University
Language: English
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spelling sg-ntu-dr.10356-940662019-12-06T18:50:15Z Pairwise alignment of DNA sequence using hypercomplex number representation Shu, Jian Jun Ouw, Li Shan School of Mechanical and Aerospace Engineering International Conference “From Scientific Computing to Computational Engineering” (1st : 2004 : Greece) DRNTU::Engineering::Computer science and engineering::Computer applications::Life and medical sciences A new set of DNA base-nucleic acid codes and their hypercomplex number representation have been introduced for taking the probability of each nucleotide into full account. A new scoring system has been proposed to suit the hypercomplex number representation of the DNA base-nucleic acid codes and incorporated with the method of dot matrix analysis and various algorithms of sequence alignment. The problem of DNA sequence alignment can be processed in a rather similar way as pairwise alignment of protein sequence. 2011-10-19T04:30:24Z 2019-12-06T18:50:15Z 2011-10-19T04:30:24Z 2019-12-06T18:50:15Z 2004 2004 Conference Paper Shu, J. J., & Ouw, L. S. (2004). Pairwise alignment of DNA sequence using hypercomplex number representation. International Conference “From Scientific Computing to Computational Engineering”. https://hdl.handle.net/10356/94066 http://hdl.handle.net/10220/7307 http://www.epsmso.gr/all_conf_index/abstracts/scce04_104.pdf 92721 en © 2004 IC-SCCE. 7 p.
institution Nanyang Technological University
building NTU Library
country Singapore
collection DR-NTU
language English
topic DRNTU::Engineering::Computer science and engineering::Computer applications::Life and medical sciences
spellingShingle DRNTU::Engineering::Computer science and engineering::Computer applications::Life and medical sciences
Shu, Jian Jun
Ouw, Li Shan
Pairwise alignment of DNA sequence using hypercomplex number representation
description A new set of DNA base-nucleic acid codes and their hypercomplex number representation have been introduced for taking the probability of each nucleotide into full account. A new scoring system has been proposed to suit the hypercomplex number representation of the DNA base-nucleic acid codes and incorporated with the method of dot matrix analysis and various algorithms of sequence alignment. The problem of DNA sequence alignment can be processed in a rather similar way as pairwise alignment of protein sequence.
author2 School of Mechanical and Aerospace Engineering
author_facet School of Mechanical and Aerospace Engineering
Shu, Jian Jun
Ouw, Li Shan
format Conference or Workshop Item
author Shu, Jian Jun
Ouw, Li Shan
author_sort Shu, Jian Jun
title Pairwise alignment of DNA sequence using hypercomplex number representation
title_short Pairwise alignment of DNA sequence using hypercomplex number representation
title_full Pairwise alignment of DNA sequence using hypercomplex number representation
title_fullStr Pairwise alignment of DNA sequence using hypercomplex number representation
title_full_unstemmed Pairwise alignment of DNA sequence using hypercomplex number representation
title_sort pairwise alignment of dna sequence using hypercomplex number representation
publishDate 2011
url https://hdl.handle.net/10356/94066
http://hdl.handle.net/10220/7307
http://www.epsmso.gr/all_conf_index/abstracts/scce04_104.pdf
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