Diffuse correlation spectroscopy with a fast Fourier transform-based software autocorrelator

Diffuse correlation spectroscopy (DCS) is an emerging noninvasive technique that probes the deep tissue blood flow, by using the time-averaged intensity autocorrelation function of the fluctuating diffuse reflectance signal. We present a fast Fourier transform (FFT)-based software autocorrelator tha...

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Main Authors: Dong, Jing, Bi, Renzhe, Ho, Jun Hui, Thong, Patricia Soo-Ping, Soo, Khee-Chee, Lee, Kijoon
Other Authors: School of Chemical and Biomedical Engineering
Format: Article
Language:English
Published: 2013
Online Access:https://hdl.handle.net/10356/98247
http://hdl.handle.net/10220/10911
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Institution: Nanyang Technological University
Language: English
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spelling sg-ntu-dr.10356-982472023-12-29T06:48:05Z Diffuse correlation spectroscopy with a fast Fourier transform-based software autocorrelator Dong, Jing Bi, Renzhe Ho, Jun Hui Thong, Patricia Soo-Ping Soo, Khee-Chee Lee, Kijoon School of Chemical and Biomedical Engineering Diffuse correlation spectroscopy (DCS) is an emerging noninvasive technique that probes the deep tissue blood flow, by using the time-averaged intensity autocorrelation function of the fluctuating diffuse reflectance signal. We present a fast Fourier transform (FFT)-based software autocorrelator that utilizes the graphical programming language LabVIEW (National Instruments) to complete data acquisition, recording, and processing tasks. The validation and evaluation experiments were conducted on an in-house flow phantom, human forearm, and photodynamic therapy (PDT) on mouse tumors under the acquisition rate of ∼400  kHz. The software autocorrelator in general has certain advantages, such as flexibility in raw photon count data preprocessing and low cost. In addition to that, our FFT-based software autocorrelator offers smoother starting and ending plateaus when compared to a hardware correlator, which could directly benefit the fitting results without too much sacrifice in speed. We show that the blood flow index (BFI) obtained by using a software autocorrelator exhibits better linear behavior in a phantom control experiment when compared to a hardware one. The results indicate that an FFT-based software autocorrelator can be an alternative solution to the conventional hardware ones in DCS systems with considerable benefits. Published version 2013-07-03T03:48:53Z 2019-12-06T19:52:37Z 2013-07-03T03:48:53Z 2019-12-06T19:52:37Z 2012 2012 Journal Article Dong, J., Bi, R., Ho, J. H., Thong, P. S. P., Soo, K.-C., & Lee, K. (2012). Diffuse correlation spectroscopy with a fast Fourier transform-based software autocorrelator. Journal of Biomedical Optics, 17(9), 097004-. 1083-3668 https://hdl.handle.net/10356/98247 http://hdl.handle.net/10220/10911 10.1117/1.JBO.17.9.097004 en Journal of biomedical optics. © 2012 Society of Photo-Optical Instrumentation Engineers (SPIE). This paper was published in Journal of Biomedical Optics and is made available as an electronic reprint (preprint) with permission of Society of Photo-Optical Instrumentation Engineers (SPIE). The paper can be found at the following official DOI: [http://dx.doi.org/10.1117/1.JBO.17.9.097004]. One print or electronic copy may be made for personal use only. Systematic or multiple reproduction, distribution to multiple locations via electronic or other means, duplication of any material in this paper for a fee or for commercial purposes, or modification of the content of the paper is prohibited and is subject to penalties under law. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
description Diffuse correlation spectroscopy (DCS) is an emerging noninvasive technique that probes the deep tissue blood flow, by using the time-averaged intensity autocorrelation function of the fluctuating diffuse reflectance signal. We present a fast Fourier transform (FFT)-based software autocorrelator that utilizes the graphical programming language LabVIEW (National Instruments) to complete data acquisition, recording, and processing tasks. The validation and evaluation experiments were conducted on an in-house flow phantom, human forearm, and photodynamic therapy (PDT) on mouse tumors under the acquisition rate of ∼400  kHz. The software autocorrelator in general has certain advantages, such as flexibility in raw photon count data preprocessing and low cost. In addition to that, our FFT-based software autocorrelator offers smoother starting and ending plateaus when compared to a hardware correlator, which could directly benefit the fitting results without too much sacrifice in speed. We show that the blood flow index (BFI) obtained by using a software autocorrelator exhibits better linear behavior in a phantom control experiment when compared to a hardware one. The results indicate that an FFT-based software autocorrelator can be an alternative solution to the conventional hardware ones in DCS systems with considerable benefits.
author2 School of Chemical and Biomedical Engineering
author_facet School of Chemical and Biomedical Engineering
Dong, Jing
Bi, Renzhe
Ho, Jun Hui
Thong, Patricia Soo-Ping
Soo, Khee-Chee
Lee, Kijoon
format Article
author Dong, Jing
Bi, Renzhe
Ho, Jun Hui
Thong, Patricia Soo-Ping
Soo, Khee-Chee
Lee, Kijoon
spellingShingle Dong, Jing
Bi, Renzhe
Ho, Jun Hui
Thong, Patricia Soo-Ping
Soo, Khee-Chee
Lee, Kijoon
Diffuse correlation spectroscopy with a fast Fourier transform-based software autocorrelator
author_sort Dong, Jing
title Diffuse correlation spectroscopy with a fast Fourier transform-based software autocorrelator
title_short Diffuse correlation spectroscopy with a fast Fourier transform-based software autocorrelator
title_full Diffuse correlation spectroscopy with a fast Fourier transform-based software autocorrelator
title_fullStr Diffuse correlation spectroscopy with a fast Fourier transform-based software autocorrelator
title_full_unstemmed Diffuse correlation spectroscopy with a fast Fourier transform-based software autocorrelator
title_sort diffuse correlation spectroscopy with a fast fourier transform-based software autocorrelator
publishDate 2013
url https://hdl.handle.net/10356/98247
http://hdl.handle.net/10220/10911
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