Automatic measurements of choroidal thickness in EDI-OCT images

Enhanced Depth Imaging (EDI) optical coherence tomography (OCT) provides high-definition cross-sectional images of the choroid in vivo, and hence is used in many clinical studies. However, measurement of choroidal thickness depends on the manual labeling, which is tedious and subjective of inter-obs...

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Main Authors: Tian, Jing, Marziliano, Pina, Baskaran, Mani, Tun, Tin Aung, Aung, Tin
Other Authors: School of Electrical and Electronic Engineering
Format: Conference or Workshop Item
Language:English
Published: 2013
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Online Access:https://hdl.handle.net/10356/99052
http://hdl.handle.net/10220/12526
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Institution: Nanyang Technological University
Language: English
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spelling sg-ntu-dr.10356-990522020-03-07T13:24:49Z Automatic measurements of choroidal thickness in EDI-OCT images Tian, Jing Marziliano, Pina Baskaran, Mani Tun, Tin Aung Aung, Tin School of Electrical and Electronic Engineering Annual International Conference of the IEEE Engineering in Medicine and Biology Society (34th : 2012 : San Diego, USA) DRNTU::Engineering::Electrical and electronic engineering Enhanced Depth Imaging (EDI) optical coherence tomography (OCT) provides high-definition cross-sectional images of the choroid in vivo, and hence is used in many clinical studies. However, measurement of choroidal thickness depends on the manual labeling, which is tedious and subjective of inter-observer differences. In this paper, we propose a fast and accurate algorithm that could measure the choroidal thickness automatically. The lower boundary of the choroid is detected by searching the biggest gradient value above the retinal pigment epithelium (RPE) and the upper boundary is formed by finding the shortest path of the graph formed by valley pixels using dynamic programming. The average of Dice's Coefficient on 10 EDI-OCT images is 94.3%, which shows good consistency of the algorithm with the manual labeling. The processing time for each image is about 2 seconds. 2013-07-30T07:58:08Z 2019-12-06T20:02:43Z 2013-07-30T07:58:08Z 2019-12-06T20:02:43Z 2012 2012 Conference Paper https://hdl.handle.net/10356/99052 http://hdl.handle.net/10220/12526 10.1109/EMBC.2012.6347205 en
institution Nanyang Technological University
building NTU Library
country Singapore
collection DR-NTU
language English
topic DRNTU::Engineering::Electrical and electronic engineering
spellingShingle DRNTU::Engineering::Electrical and electronic engineering
Tian, Jing
Marziliano, Pina
Baskaran, Mani
Tun, Tin Aung
Aung, Tin
Automatic measurements of choroidal thickness in EDI-OCT images
description Enhanced Depth Imaging (EDI) optical coherence tomography (OCT) provides high-definition cross-sectional images of the choroid in vivo, and hence is used in many clinical studies. However, measurement of choroidal thickness depends on the manual labeling, which is tedious and subjective of inter-observer differences. In this paper, we propose a fast and accurate algorithm that could measure the choroidal thickness automatically. The lower boundary of the choroid is detected by searching the biggest gradient value above the retinal pigment epithelium (RPE) and the upper boundary is formed by finding the shortest path of the graph formed by valley pixels using dynamic programming. The average of Dice's Coefficient on 10 EDI-OCT images is 94.3%, which shows good consistency of the algorithm with the manual labeling. The processing time for each image is about 2 seconds.
author2 School of Electrical and Electronic Engineering
author_facet School of Electrical and Electronic Engineering
Tian, Jing
Marziliano, Pina
Baskaran, Mani
Tun, Tin Aung
Aung, Tin
format Conference or Workshop Item
author Tian, Jing
Marziliano, Pina
Baskaran, Mani
Tun, Tin Aung
Aung, Tin
author_sort Tian, Jing
title Automatic measurements of choroidal thickness in EDI-OCT images
title_short Automatic measurements of choroidal thickness in EDI-OCT images
title_full Automatic measurements of choroidal thickness in EDI-OCT images
title_fullStr Automatic measurements of choroidal thickness in EDI-OCT images
title_full_unstemmed Automatic measurements of choroidal thickness in EDI-OCT images
title_sort automatic measurements of choroidal thickness in edi-oct images
publishDate 2013
url https://hdl.handle.net/10356/99052
http://hdl.handle.net/10220/12526
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