Automatic measurements of choroidal thickness in EDI-OCT images
Enhanced Depth Imaging (EDI) optical coherence tomography (OCT) provides high-definition cross-sectional images of the choroid in vivo, and hence is used in many clinical studies. However, measurement of choroidal thickness depends on the manual labeling, which is tedious and subjective of inter-obs...
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sg-ntu-dr.10356-990522020-03-07T13:24:49Z Automatic measurements of choroidal thickness in EDI-OCT images Tian, Jing Marziliano, Pina Baskaran, Mani Tun, Tin Aung Aung, Tin School of Electrical and Electronic Engineering Annual International Conference of the IEEE Engineering in Medicine and Biology Society (34th : 2012 : San Diego, USA) DRNTU::Engineering::Electrical and electronic engineering Enhanced Depth Imaging (EDI) optical coherence tomography (OCT) provides high-definition cross-sectional images of the choroid in vivo, and hence is used in many clinical studies. However, measurement of choroidal thickness depends on the manual labeling, which is tedious and subjective of inter-observer differences. In this paper, we propose a fast and accurate algorithm that could measure the choroidal thickness automatically. The lower boundary of the choroid is detected by searching the biggest gradient value above the retinal pigment epithelium (RPE) and the upper boundary is formed by finding the shortest path of the graph formed by valley pixels using dynamic programming. The average of Dice's Coefficient on 10 EDI-OCT images is 94.3%, which shows good consistency of the algorithm with the manual labeling. The processing time for each image is about 2 seconds. 2013-07-30T07:58:08Z 2019-12-06T20:02:43Z 2013-07-30T07:58:08Z 2019-12-06T20:02:43Z 2012 2012 Conference Paper https://hdl.handle.net/10356/99052 http://hdl.handle.net/10220/12526 10.1109/EMBC.2012.6347205 en |
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DRNTU::Engineering::Electrical and electronic engineering Tian, Jing Marziliano, Pina Baskaran, Mani Tun, Tin Aung Aung, Tin Automatic measurements of choroidal thickness in EDI-OCT images |
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Enhanced Depth Imaging (EDI) optical coherence tomography (OCT) provides high-definition cross-sectional images of the choroid in vivo, and hence is used in many clinical studies. However, measurement of choroidal thickness depends on the manual labeling, which is tedious and subjective of inter-observer differences. In this paper, we propose a fast and accurate algorithm that could measure the choroidal thickness automatically. The lower boundary of the choroid is detected by searching the biggest gradient value above the retinal pigment epithelium (RPE) and the upper boundary is formed by finding the shortest path of the graph formed by valley pixels using dynamic programming. The average of Dice's Coefficient on 10 EDI-OCT images is 94.3%, which shows good consistency of the algorithm with the manual labeling. The processing time for each image is about 2 seconds. |
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School of Electrical and Electronic Engineering |
author_facet |
School of Electrical and Electronic Engineering Tian, Jing Marziliano, Pina Baskaran, Mani Tun, Tin Aung Aung, Tin |
format |
Conference or Workshop Item |
author |
Tian, Jing Marziliano, Pina Baskaran, Mani Tun, Tin Aung Aung, Tin |
author_sort |
Tian, Jing |
title |
Automatic measurements of choroidal thickness in EDI-OCT images |
title_short |
Automatic measurements of choroidal thickness in EDI-OCT images |
title_full |
Automatic measurements of choroidal thickness in EDI-OCT images |
title_fullStr |
Automatic measurements of choroidal thickness in EDI-OCT images |
title_full_unstemmed |
Automatic measurements of choroidal thickness in EDI-OCT images |
title_sort |
automatic measurements of choroidal thickness in edi-oct images |
publishDate |
2013 |
url |
https://hdl.handle.net/10356/99052 http://hdl.handle.net/10220/12526 |
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