A new strategy for enhancing imputation quality of rare variants from next-generation sequencing data via combining SNP and exome chip data

10.1186/s12864-015-2192-y

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Main Authors: Kim Y.J., Lee J., Kim B.-J., Park T., Abecasis G., Almeida M., Altshuler D., Asimit J.L., Atzmon G., Barber M., Barzilai N., Beer N.L., Bell G.I., Below J., Blackwell T., Blangero J., Boehnke M., Bowden D.W., Burtt N., Chambers J., Chen H., Chen P., Chines P.S., Choi S., Churchhouse C., Cingolani P., Cornes B.K., Cox N., Day-Williams A.G., Duggirala R., Dupuis J., Dyer T., Feng S., Fernandez-Tajes J., Ferreira T., Fingerlin T.E., Flannick J., Florez J., Fontanillas P., Frayling T.M., Fuchsberger C., Gamazon E.R., Gaulton K., Ghosh S., Glaser B., Gloyn A., Grossman R.L., Grundstad J., Hanis C., Heath A., Highland H., Horikoshi M., Huh I.-S., Huyghe J.R., Ikram K., Jablonski K.A., Jun G., Kato N., Kim J., King C.R., Kooner J., Kwon M.-S., Im H.K., Laakso M., Lam K.K.-Y., Lee S., Lehman D.M., Li H., Lindgren C.M., Liu X., Livne O.E., Locke A.E., Mahajan A., Maller J.B., Manning A.K., Maxwell T.J., Mazoure A., McCarthy M.I., Meigs J.B., Min B., Mohlke K.L., Morris A.P., Musani S., Nagai Y., Ng M.C.Y., Nicolae D., Oh S., Palmer N., Pollin T.I., Prokopenko I., Reich D., Rivas M.A., Scott L.J., Seielstad M., Cho Y.S., Sim X., Sladek R., Smith P., Tachmazidou I., Tai E.S., Teo Y.Y., Teslovich T.M., Torres J., Trubetskoy V., Willems S.M., Williams A.L., Wilson J.G., Wiltshire S., Won S., Wood A.R., Xu W., Yoon J., Zawistowski M., Zeggini E., Zhang W., Zöllner S.
Other Authors: DEPT OF MEDICINE
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Published: BioMed Central Ltd. 2018
Online Access:http://scholarbank.nus.edu.sg/handle/10635/143209
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spelling sg-nus-scholar.10635-1432092023-10-30T07:34:04Z A new strategy for enhancing imputation quality of rare variants from next-generation sequencing data via combining SNP and exome chip data Kim Y.J. Lee J. Kim B.-J. Park T. Abecasis G. Almeida M. Altshuler D. Asimit J.L. Atzmon G. Barber M. Barzilai N. Beer N.L. Bell G.I. Below J. Blackwell T. Blangero J. Boehnke M. Bowden D.W. Burtt N. Chambers J. Chen H. Chen P. Chines P.S. Choi S. Churchhouse C. Cingolani P. Cornes B.K. Cox N. Day-Williams A.G. Duggirala R. Dupuis J. Dyer T. Feng S. Fernandez-Tajes J. Ferreira T. Fingerlin T.E. Flannick J. Florez J. Fontanillas P. Frayling T.M. Fuchsberger C. Gamazon E.R. Gaulton K. Ghosh S. Glaser B. Gloyn A. Grossman R.L. Grundstad J. Hanis C. Heath A. Highland H. Horikoshi M. Huh I.-S. Huyghe J.R. Ikram K. Jablonski K.A. Jun G. Kato N. Kim J. Kim Y.J. Kim B.-J. Lee J. King C.R. Kooner J. Kwon M.-S. Im H.K. Laakso M. Lam K.K.-Y. Lee J. Lee S. Lee S. Lehman D.M. Li H. Lindgren C.M. Liu X. Livne O.E. Locke A.E. Mahajan A. Maller J.B. Manning A.K. Maxwell T.J. Mazoure A. McCarthy M.I. Meigs J.B. Min B. Mohlke K.L. Morris A.P. Musani S. Nagai Y. Ng M.C.Y. Nicolae D. Oh S. Palmer N. Park T. Pollin T.I. Prokopenko I. Reich D. Rivas M.A. Scott L.J. Seielstad M. Cho Y.S. Sim X. Sladek R. Smith P. Tachmazidou I. Tai E.S. Teo Y.Y. Teslovich T.M. Torres J. Trubetskoy V. Willems S.M. Williams A.L. Wilson J.G. Wiltshire S. Won S. Wood A.R. Xu W. Yoon J. Zawistowski M. Zeggini E. Zhang W. Zöllner S. DEPT OF MEDICINE SAW SWEE HOCK SCHOOL OF PUBLIC HEALTH 10.1186/s12864-015-2192-y BMC Genomics 16 1 1109 2018-06-14T00:58:35Z 2018-06-14T00:58:35Z 2015 Article Kim Y.J., Lee J., Kim B.-J., Park T., Abecasis G., Almeida M., Altshuler D., Asimit J.L., Atzmon G., Barber M., Barzilai N., Beer N.L., Bell G.I., Below J., Blackwell T., Blangero J., Boehnke M., Bowden D.W., Burtt N., Chambers J., Chen H., Chen P., Chines P.S., Choi S., Churchhouse C., Cingolani P., Cornes B.K., Cox N., Day-Williams A.G., Duggirala R., Dupuis J., Dyer T., Feng S., Fernandez-Tajes J., Ferreira T., Fingerlin T.E., Flannick J., Florez J., Fontanillas P., Frayling T.M., Fuchsberger C., Gamazon E.R., Gaulton K., Ghosh S., Glaser B., Gloyn A., Grossman R.L., Grundstad J., Hanis C., Heath A., Highland H., Horikoshi M., Huh I.-S., Huyghe J.R., Ikram K., Jablonski K.A., Jun G., Kato N., Kim J., Kim Y.J., Kim B.-J., Lee J., King C.R., Kooner J., Kwon M.-S., Im H.K., Laakso M., Lam K.K.-Y., Lee J., Lee S., Lee S., Lehman D.M., Li H., Lindgren C.M., Liu X., Livne O.E., Locke A.E., Mahajan A., Maller J.B., Manning A.K., Maxwell T.J., Mazoure A., McCarthy M.I., Meigs J.B., Min B., Mohlke K.L., Morris A.P., Musani S., Nagai Y., Ng M.C.Y., Nicolae D., Oh S., Palmer N., Park T., Pollin T.I., Prokopenko I., Reich D., Rivas M.A., Scott L.J., Seielstad M., Cho Y.S., Sim X., Sladek R., Smith P., Tachmazidou I., Tai E.S., Teo Y.Y., Teslovich T.M., Torres J., Trubetskoy V., Willems S.M., Williams A.L., Wilson J.G., Wiltshire S., Won S., Wood A.R., Xu W., Yoon J., Zawistowski M., Zeggini E., Zhang W., Zöllner S. (2015). A new strategy for enhancing imputation quality of rare variants from next-generation sequencing data via combining SNP and exome chip data. BMC Genomics 16 (1) : 1109. ScholarBank@NUS Repository. https://doi.org/10.1186/s12864-015-2192-y 14712164 http://scholarbank.nus.edu.sg/handle/10635/143209 000376093200004 BioMed Central Ltd. Scopus
institution National University of Singapore
building NUS Library
continent Asia
country Singapore
Singapore
content_provider NUS Library
collection ScholarBank@NUS
description 10.1186/s12864-015-2192-y
author2 DEPT OF MEDICINE
author_facet DEPT OF MEDICINE
Kim Y.J.
Lee J.
Kim B.-J.
Park T.
Abecasis G.
Almeida M.
Altshuler D.
Asimit J.L.
Atzmon G.
Barber M.
Barzilai N.
Beer N.L.
Bell G.I.
Below J.
Blackwell T.
Blangero J.
Boehnke M.
Bowden D.W.
Burtt N.
Chambers J.
Chen H.
Chen P.
Chines P.S.
Choi S.
Churchhouse C.
Cingolani P.
Cornes B.K.
Cox N.
Day-Williams A.G.
Duggirala R.
Dupuis J.
Dyer T.
Feng S.
Fernandez-Tajes J.
Ferreira T.
Fingerlin T.E.
Flannick J.
Florez J.
Fontanillas P.
Frayling T.M.
Fuchsberger C.
Gamazon E.R.
Gaulton K.
Ghosh S.
Glaser B.
Gloyn A.
Grossman R.L.
Grundstad J.
Hanis C.
Heath A.
Highland H.
Horikoshi M.
Huh I.-S.
Huyghe J.R.
Ikram K.
Jablonski K.A.
Jun G.
Kato N.
Kim J.
Kim Y.J.
Kim B.-J.
Lee J.
King C.R.
Kooner J.
Kwon M.-S.
Im H.K.
Laakso M.
Lam K.K.-Y.
Lee J.
Lee S.
Lee S.
Lehman D.M.
Li H.
Lindgren C.M.
Liu X.
Livne O.E.
Locke A.E.
Mahajan A.
Maller J.B.
Manning A.K.
Maxwell T.J.
Mazoure A.
McCarthy M.I.
Meigs J.B.
Min B.
Mohlke K.L.
Morris A.P.
Musani S.
Nagai Y.
Ng M.C.Y.
Nicolae D.
Oh S.
Palmer N.
Park T.
Pollin T.I.
Prokopenko I.
Reich D.
Rivas M.A.
Scott L.J.
Seielstad M.
Cho Y.S.
Sim X.
Sladek R.
Smith P.
Tachmazidou I.
Tai E.S.
Teo Y.Y.
Teslovich T.M.
Torres J.
Trubetskoy V.
Willems S.M.
Williams A.L.
Wilson J.G.
Wiltshire S.
Won S.
Wood A.R.
Xu W.
Yoon J.
Zawistowski M.
Zeggini E.
Zhang W.
Zöllner S.
format Article
author Kim Y.J.
Lee J.
Kim B.-J.
Park T.
Abecasis G.
Almeida M.
Altshuler D.
Asimit J.L.
Atzmon G.
Barber M.
Barzilai N.
Beer N.L.
Bell G.I.
Below J.
Blackwell T.
Blangero J.
Boehnke M.
Bowden D.W.
Burtt N.
Chambers J.
Chen H.
Chen P.
Chines P.S.
Choi S.
Churchhouse C.
Cingolani P.
Cornes B.K.
Cox N.
Day-Williams A.G.
Duggirala R.
Dupuis J.
Dyer T.
Feng S.
Fernandez-Tajes J.
Ferreira T.
Fingerlin T.E.
Flannick J.
Florez J.
Fontanillas P.
Frayling T.M.
Fuchsberger C.
Gamazon E.R.
Gaulton K.
Ghosh S.
Glaser B.
Gloyn A.
Grossman R.L.
Grundstad J.
Hanis C.
Heath A.
Highland H.
Horikoshi M.
Huh I.-S.
Huyghe J.R.
Ikram K.
Jablonski K.A.
Jun G.
Kato N.
Kim J.
Kim Y.J.
Kim B.-J.
Lee J.
King C.R.
Kooner J.
Kwon M.-S.
Im H.K.
Laakso M.
Lam K.K.-Y.
Lee J.
Lee S.
Lee S.
Lehman D.M.
Li H.
Lindgren C.M.
Liu X.
Livne O.E.
Locke A.E.
Mahajan A.
Maller J.B.
Manning A.K.
Maxwell T.J.
Mazoure A.
McCarthy M.I.
Meigs J.B.
Min B.
Mohlke K.L.
Morris A.P.
Musani S.
Nagai Y.
Ng M.C.Y.
Nicolae D.
Oh S.
Palmer N.
Park T.
Pollin T.I.
Prokopenko I.
Reich D.
Rivas M.A.
Scott L.J.
Seielstad M.
Cho Y.S.
Sim X.
Sladek R.
Smith P.
Tachmazidou I.
Tai E.S.
Teo Y.Y.
Teslovich T.M.
Torres J.
Trubetskoy V.
Willems S.M.
Williams A.L.
Wilson J.G.
Wiltshire S.
Won S.
Wood A.R.
Xu W.
Yoon J.
Zawistowski M.
Zeggini E.
Zhang W.
Zöllner S.
spellingShingle Kim Y.J.
Lee J.
Kim B.-J.
Park T.
Abecasis G.
Almeida M.
Altshuler D.
Asimit J.L.
Atzmon G.
Barber M.
Barzilai N.
Beer N.L.
Bell G.I.
Below J.
Blackwell T.
Blangero J.
Boehnke M.
Bowden D.W.
Burtt N.
Chambers J.
Chen H.
Chen P.
Chines P.S.
Choi S.
Churchhouse C.
Cingolani P.
Cornes B.K.
Cox N.
Day-Williams A.G.
Duggirala R.
Dupuis J.
Dyer T.
Feng S.
Fernandez-Tajes J.
Ferreira T.
Fingerlin T.E.
Flannick J.
Florez J.
Fontanillas P.
Frayling T.M.
Fuchsberger C.
Gamazon E.R.
Gaulton K.
Ghosh S.
Glaser B.
Gloyn A.
Grossman R.L.
Grundstad J.
Hanis C.
Heath A.
Highland H.
Horikoshi M.
Huh I.-S.
Huyghe J.R.
Ikram K.
Jablonski K.A.
Jun G.
Kato N.
Kim J.
Kim Y.J.
Kim B.-J.
Lee J.
King C.R.
Kooner J.
Kwon M.-S.
Im H.K.
Laakso M.
Lam K.K.-Y.
Lee J.
Lee S.
Lee S.
Lehman D.M.
Li H.
Lindgren C.M.
Liu X.
Livne O.E.
Locke A.E.
Mahajan A.
Maller J.B.
Manning A.K.
Maxwell T.J.
Mazoure A.
McCarthy M.I.
Meigs J.B.
Min B.
Mohlke K.L.
Morris A.P.
Musani S.
Nagai Y.
Ng M.C.Y.
Nicolae D.
Oh S.
Palmer N.
Park T.
Pollin T.I.
Prokopenko I.
Reich D.
Rivas M.A.
Scott L.J.
Seielstad M.
Cho Y.S.
Sim X.
Sladek R.
Smith P.
Tachmazidou I.
Tai E.S.
Teo Y.Y.
Teslovich T.M.
Torres J.
Trubetskoy V.
Willems S.M.
Williams A.L.
Wilson J.G.
Wiltshire S.
Won S.
Wood A.R.
Xu W.
Yoon J.
Zawistowski M.
Zeggini E.
Zhang W.
Zöllner S.
A new strategy for enhancing imputation quality of rare variants from next-generation sequencing data via combining SNP and exome chip data
author_sort Kim Y.J.
title A new strategy for enhancing imputation quality of rare variants from next-generation sequencing data via combining SNP and exome chip data
title_short A new strategy for enhancing imputation quality of rare variants from next-generation sequencing data via combining SNP and exome chip data
title_full A new strategy for enhancing imputation quality of rare variants from next-generation sequencing data via combining SNP and exome chip data
title_fullStr A new strategy for enhancing imputation quality of rare variants from next-generation sequencing data via combining SNP and exome chip data
title_full_unstemmed A new strategy for enhancing imputation quality of rare variants from next-generation sequencing data via combining SNP and exome chip data
title_sort new strategy for enhancing imputation quality of rare variants from next-generation sequencing data via combining snp and exome chip data
publisher BioMed Central Ltd.
publishDate 2018
url http://scholarbank.nus.edu.sg/handle/10635/143209
_version_ 1781791324949708800