An alignment-free algorithm in comparing the similarity of protein sequences based on Pseudo-Markov transition probabilities among amino acids

10.1371/journal.pone.0167430

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Main Authors:	Li Y., Song T., Yang J., Zhang Y.
Other Authors:	CENTRE FOR MARITIME STUDIES
Format:	Article
Published:	2019
Subjects:	amino acid glycosidase xylan endo 1,3 beta xylosidase protein accuracy algorithm alignment free algorithm amino acid sequence Article correlation coefficient human nonhuman phylogenetic tree probability thermostability chemistry procedures sequence alignment sequence analysis Algorithms Amino Acid Sequence Amino Acids Glycoside Hydrolases Probability Proteins Sequence Alignment Sequence Analysis, Protein
Online Access:	https://scholarbank.nus.edu.sg/handle/10635/161540
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Institution:	National University of Singapore

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spelling	sg-nus-scholar.10635-1615402023-10-31T20:50:35Z An alignment-free algorithm in comparing the similarity of protein sequences based on Pseudo-Markov transition probabilities among amino acids Li Y. Song T. Yang J. Zhang Y. Yang J. CENTRE FOR MARITIME STUDIES amino acid glycosidase xylan endo 1,3 beta xylosidase amino acid protein accuracy algorithm alignment free algorithm amino acid sequence Article correlation coefficient human nonhuman phylogenetic tree probability thermostability algorithm amino acid sequence chemistry procedures sequence alignment sequence analysis Algorithms Amino Acid Sequence Amino Acids Glycoside Hydrolases Probability Proteins Sequence Alignment Sequence Analysis, Protein 10.1371/journal.pone.0167430 PLoS ONE 11 12 e0167430 2019-11-06T07:42:15Z 2019-11-06T07:42:15Z 2016 Article Li Y., Song T., Yang J., Zhang Y., Yang J. (2016). An alignment-free algorithm in comparing the similarity of protein sequences based on Pseudo-Markov transition probabilities among amino acids. PLoS ONE 11 (12) : e0167430. ScholarBank@NUS Repository. https://doi.org/10.1371/journal.pone.0167430 19326203 https://scholarbank.nus.edu.sg/handle/10635/161540 Attribution 4.0 International http://creativecommons.org/licenses/by/4.0/ Unpaywall 20191101
institution	National University of Singapore
building	NUS Library
continent	Asia
country	Singapore Singapore
content_provider	NUS Library
collection	ScholarBank@NUS
topic	amino acid glycosidase xylan endo 1,3 beta xylosidase amino acid protein accuracy algorithm alignment free algorithm amino acid sequence Article correlation coefficient human nonhuman phylogenetic tree probability thermostability algorithm amino acid sequence chemistry procedures sequence alignment sequence analysis Algorithms Amino Acid Sequence Amino Acids Glycoside Hydrolases Probability Proteins Sequence Alignment Sequence Analysis, Protein
spellingShingle	amino acid glycosidase xylan endo 1,3 beta xylosidase amino acid protein accuracy algorithm alignment free algorithm amino acid sequence Article correlation coefficient human nonhuman phylogenetic tree probability thermostability algorithm amino acid sequence chemistry procedures sequence alignment sequence analysis Algorithms Amino Acid Sequence Amino Acids Glycoside Hydrolases Probability Proteins Sequence Alignment Sequence Analysis, Protein Li Y. Song T. Yang J. Zhang Y. Yang J. An alignment-free algorithm in comparing the similarity of protein sequences based on Pseudo-Markov transition probabilities among amino acids
description	10.1371/journal.pone.0167430
author2	CENTRE FOR MARITIME STUDIES
author_facet	CENTRE FOR MARITIME STUDIES Li Y. Song T. Yang J. Zhang Y. Yang J.
format	Article
author	Li Y. Song T. Yang J. Zhang Y. Yang J.
author_sort	Li Y.
title	An alignment-free algorithm in comparing the similarity of protein sequences based on Pseudo-Markov transition probabilities among amino acids
title_short	An alignment-free algorithm in comparing the similarity of protein sequences based on Pseudo-Markov transition probabilities among amino acids
title_full	An alignment-free algorithm in comparing the similarity of protein sequences based on Pseudo-Markov transition probabilities among amino acids
title_fullStr	An alignment-free algorithm in comparing the similarity of protein sequences based on Pseudo-Markov transition probabilities among amino acids
title_full_unstemmed	An alignment-free algorithm in comparing the similarity of protein sequences based on Pseudo-Markov transition probabilities among amino acids
title_sort	alignment-free algorithm in comparing the similarity of protein sequences based on pseudo-markov transition probabilities among amino acids
publishDate	2019
url	https://scholarbank.nus.edu.sg/handle/10635/161540
_version_	1781791785633185792

An alignment-free algorithm in comparing the similarity of protein sequences based on Pseudo-Markov transition probabilities among amino acids

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