Predicting the Functions and Specificity of Triterpenoid Synthases: A Mechanism-Based Multi-intermediate Docking Approach

10.1371/journal.pcbi.1003874

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Main Authors: Tian B.-X., Wallrapp F.H., Holiday G.L., Chow J.-Y., Babbitt P.C., Poulter C.D., Jacobson M.P.
Other Authors: BIOCHEMISTRY
Format: Article
Published: 2019
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Online Access:https://scholarbank.nus.edu.sg/handle/10635/161945
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spelling sg-nus-scholar.10635-1619452024-04-22T02:51:10Z Predicting the Functions and Specificity of Triterpenoid Synthases: A Mechanism-Based Multi-intermediate Docking Approach Tian B.-X. Wallrapp F.H. Holiday G.L. Chow J.-Y. Babbitt P.C. Poulter C.D. Jacobson M.P. BIOCHEMISTRY triterpenoid triterpenoid synthase unclassified drug isomerase mutase pinene cyclase I squalene-hopene cyclase terpene transferase amino acid sequence Article binding affinity binding site catalysis comparative study crystal structure enzyme activity enzyme binding enzyme specificity enzyme structure mathematical computing measurement accuracy molecular docking molecular mechanics mutagenesis prediction protein function biology chemistry metabolism protein engineering Alkyl and Aryl Transferases Computational Biology Intramolecular Lyases Intramolecular Transferases Molecular Docking Simulation Protein Engineering Terpenes 10.1371/journal.pcbi.1003874 PLoS Computational Biology 10 10 Jan-16 2019-11-08T08:49:19Z 2019-11-08T08:49:19Z 2014 Article Tian B.-X., Wallrapp F.H., Holiday G.L., Chow J.-Y., Babbitt P.C., Poulter C.D., Jacobson M.P. (2014). Predicting the Functions and Specificity of Triterpenoid Synthases: A Mechanism-Based Multi-intermediate Docking Approach. PLoS Computational Biology 10 (10) : Jan-16. ScholarBank@NUS Repository. https://doi.org/10.1371/journal.pcbi.1003874 1553734X https://scholarbank.nus.edu.sg/handle/10635/161945 Attribution 4.0 International http://creativecommons.org/licenses/by/4.0/ Unpaywall 20191101
institution National University of Singapore
building NUS Library
continent Asia
country Singapore
Singapore
content_provider NUS Library
collection ScholarBank@NUS
topic triterpenoid
triterpenoid synthase
unclassified drug
isomerase
mutase
pinene cyclase I
squalene-hopene cyclase
terpene
transferase
amino acid sequence
Article
binding affinity
binding site
catalysis
comparative study
crystal structure
enzyme activity
enzyme binding
enzyme specificity
enzyme structure
mathematical computing
measurement accuracy
molecular docking
molecular mechanics
mutagenesis
prediction
protein function
biology
chemistry
metabolism
protein engineering
Alkyl and Aryl Transferases
Computational Biology
Intramolecular Lyases
Intramolecular Transferases
Molecular Docking Simulation
Protein Engineering
Terpenes
spellingShingle triterpenoid
triterpenoid synthase
unclassified drug
isomerase
mutase
pinene cyclase I
squalene-hopene cyclase
terpene
transferase
amino acid sequence
Article
binding affinity
binding site
catalysis
comparative study
crystal structure
enzyme activity
enzyme binding
enzyme specificity
enzyme structure
mathematical computing
measurement accuracy
molecular docking
molecular mechanics
mutagenesis
prediction
protein function
biology
chemistry
metabolism
protein engineering
Alkyl and Aryl Transferases
Computational Biology
Intramolecular Lyases
Intramolecular Transferases
Molecular Docking Simulation
Protein Engineering
Terpenes
Tian B.-X.
Wallrapp F.H.
Holiday G.L.
Chow J.-Y.
Babbitt P.C.
Poulter C.D.
Jacobson M.P.
Predicting the Functions and Specificity of Triterpenoid Synthases: A Mechanism-Based Multi-intermediate Docking Approach
description 10.1371/journal.pcbi.1003874
author2 BIOCHEMISTRY
author_facet BIOCHEMISTRY
Tian B.-X.
Wallrapp F.H.
Holiday G.L.
Chow J.-Y.
Babbitt P.C.
Poulter C.D.
Jacobson M.P.
format Article
author Tian B.-X.
Wallrapp F.H.
Holiday G.L.
Chow J.-Y.
Babbitt P.C.
Poulter C.D.
Jacobson M.P.
author_sort Tian B.-X.
title Predicting the Functions and Specificity of Triterpenoid Synthases: A Mechanism-Based Multi-intermediate Docking Approach
title_short Predicting the Functions and Specificity of Triterpenoid Synthases: A Mechanism-Based Multi-intermediate Docking Approach
title_full Predicting the Functions and Specificity of Triterpenoid Synthases: A Mechanism-Based Multi-intermediate Docking Approach
title_fullStr Predicting the Functions and Specificity of Triterpenoid Synthases: A Mechanism-Based Multi-intermediate Docking Approach
title_full_unstemmed Predicting the Functions and Specificity of Triterpenoid Synthases: A Mechanism-Based Multi-intermediate Docking Approach
title_sort predicting the functions and specificity of triterpenoid synthases: a mechanism-based multi-intermediate docking approach
publishDate 2019
url https://scholarbank.nus.edu.sg/handle/10635/161945
_version_ 1800913828079206400