RiboTagger: Fast and unbiased 16S/18S profiling using whole community shotgun metagenomic or metatranscriptome surveys

10.1186/s12859-016-1378-x

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Bibliographic Details
Main Authors:	Xie C., Goi C.L.W., Huson D.H., Little P.F.R., Williams R.B.H.
Other Authors:	LIFE SCIENCES INSTITUTE
Format:	Article
Published:	BioMed Central Ltd. 2020
Subjects:	Ecology Microorganisms Nucleic acids RNA Surveys High sensitivity High throughput Microbial communities Microbial ecology Ribosomal RNA Sequence analysis Small subunits Variable regions Nucleic acid sequences ribosome DNA RNA 16S RNA 18S transcriptome bacterium biology DNA sequence genetics high throughput sequencing metagenome metagenomics procedures software Bacteria Computational Biology DNA, Ribosomal High-Throughput Nucleotide Sequencing Metagenome Metagenomics RNA, Ribosomal, 16S RNA, Ribosomal, 18S Sequence Analysis, DNA Software Transcriptome
Online Access:	https://scholarbank.nus.edu.sg/handle/10635/174241
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Institution:	National University of Singapore

id	sg-nus-scholar.10635-174241
record_format	dspace
spelling	sg-nus-scholar.10635-1742412023-11-01T08:05:37Z RiboTagger: Fast and unbiased 16S/18S profiling using whole community shotgun metagenomic or metatranscriptome surveys Xie C. Goi C.L.W. Huson D.H. Little P.F.R. Williams R.B.H. LIFE SCIENCES INSTITUTE Ecology Microorganisms Nucleic acids RNA Surveys High sensitivity High throughput Microbial communities Microbial ecology Ribosomal RNA Sequence analysis Small subunits Variable regions Nucleic acid sequences ribosome DNA RNA 16S RNA 18S transcriptome bacterium biology DNA sequence genetics high throughput sequencing metagenome metagenomics procedures software Bacteria Computational Biology DNA, Ribosomal High-Throughput Nucleotide Sequencing Metagenome Metagenomics RNA, Ribosomal, 16S RNA, Ribosomal, 18S Sequence Analysis, DNA Software Transcriptome 10.1186/s12859-016-1378-x BMC Bioinformatics 17 508 2020-09-04T02:01:36Z 2020-09-04T02:01:36Z 2016 Article Xie C., Goi C.L.W., Huson D.H., Little P.F.R., Williams R.B.H. (2016). RiboTagger: Fast and unbiased 16S/18S profiling using whole community shotgun metagenomic or metatranscriptome surveys. BMC Bioinformatics 17 : 508. ScholarBank@NUS Repository. https://doi.org/10.1186/s12859-016-1378-x 14712105 https://scholarbank.nus.edu.sg/handle/10635/174241 BioMed Central Ltd. Unpaywall 20200831
institution	National University of Singapore
building	NUS Library
continent	Asia
country	Singapore Singapore
content_provider	NUS Library
collection	ScholarBank@NUS
topic	Ecology Microorganisms Nucleic acids RNA Surveys High sensitivity High throughput Microbial communities Microbial ecology Ribosomal RNA Sequence analysis Small subunits Variable regions Nucleic acid sequences ribosome DNA RNA 16S RNA 18S transcriptome bacterium biology DNA sequence genetics high throughput sequencing metagenome metagenomics procedures software Bacteria Computational Biology DNA, Ribosomal High-Throughput Nucleotide Sequencing Metagenome Metagenomics RNA, Ribosomal, 16S RNA, Ribosomal, 18S Sequence Analysis, DNA Software Transcriptome
spellingShingle	Ecology Microorganisms Nucleic acids RNA Surveys High sensitivity High throughput Microbial communities Microbial ecology Ribosomal RNA Sequence analysis Small subunits Variable regions Nucleic acid sequences ribosome DNA RNA 16S RNA 18S transcriptome bacterium biology DNA sequence genetics high throughput sequencing metagenome metagenomics procedures software Bacteria Computational Biology DNA, Ribosomal High-Throughput Nucleotide Sequencing Metagenome Metagenomics RNA, Ribosomal, 16S RNA, Ribosomal, 18S Sequence Analysis, DNA Software Transcriptome Xie C. Goi C.L.W. Huson D.H. Little P.F.R. Williams R.B.H. RiboTagger: Fast and unbiased 16S/18S profiling using whole community shotgun metagenomic or metatranscriptome surveys
description	10.1186/s12859-016-1378-x
author2	LIFE SCIENCES INSTITUTE
author_facet	LIFE SCIENCES INSTITUTE Xie C. Goi C.L.W. Huson D.H. Little P.F.R. Williams R.B.H.
format	Article
author	Xie C. Goi C.L.W. Huson D.H. Little P.F.R. Williams R.B.H.
author_sort	Xie C.
title	RiboTagger: Fast and unbiased 16S/18S profiling using whole community shotgun metagenomic or metatranscriptome surveys
title_short	RiboTagger: Fast and unbiased 16S/18S profiling using whole community shotgun metagenomic or metatranscriptome surveys
title_full	RiboTagger: Fast and unbiased 16S/18S profiling using whole community shotgun metagenomic or metatranscriptome surveys
title_fullStr	RiboTagger: Fast and unbiased 16S/18S profiling using whole community shotgun metagenomic or metatranscriptome surveys
title_full_unstemmed	RiboTagger: Fast and unbiased 16S/18S profiling using whole community shotgun metagenomic or metatranscriptome surveys
title_sort	ribotagger: fast and unbiased 16s/18s profiling using whole community shotgun metagenomic or metatranscriptome surveys
publisher	BioMed Central Ltd.
publishDate	2020
url	https://scholarbank.nus.edu.sg/handle/10635/174241
_version_	1781792183455580160

RiboTagger: Fast and unbiased 16S/18S profiling using whole community shotgun metagenomic or metatranscriptome surveys

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