A novel algorithm based on visual saliency attention for localization and segmentation in rapidly-stained leukocyte images

In this paper, we propose a fast hierarchical framework of leukocyte localization and segmentation in rapidly-stained leukocyte images (RSLI) with complex backgrounds and varying illumination. The proposed framework contains two main steps. First, a nucleus saliency model based on average absolute d...

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Main Authors: ZHENG, Xin, WANG, Yong, WANG, Guoyou, CHEN, Zhong
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Language:English
Published: Institutional Knowledge at Singapore Management University 2014
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Online Access:https://ink.library.smu.edu.sg/sis_research/5363
https://ink.library.smu.edu.sg/context/sis_research/article/6367/viewcontent/leukocyte_micron14.pdf
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spelling sg-smu-ink.sis_research-63672020-11-19T07:09:51Z A novel algorithm based on visual saliency attention for localization and segmentation in rapidly-stained leukocyte images ZHENG, Xin WANG, Yong WANG, Guoyou CHEN, Zhong In this paper, we propose a fast hierarchical framework of leukocyte localization and segmentation in rapidly-stained leukocyte images (RSLI) with complex backgrounds and varying illumination. The proposed framework contains two main steps. First, a nucleus saliency model based on average absolute difference is built, which locates each leukocyte precisely while effectively removes dyeing impurities and erythrocyte fragments. Secondly, two different schemes are presented for segmenting the nuclei and cytoplasm respectively. As for nuclei segmentation, to solve the overlap problem between leukocytes, we extract the nucleus lobes first and further group them. The lobes extraction is realized by the histogram-based contrast map and watershed segmentation, taking into account the saliency and similarity of nucleus color. Meanwhile, as for cytoplasm segmentation, to extract the blurry contour of the cytoplasm under instable illumination, we propose a cytoplasm enhancement based on tri-modal histogram specification, which specifically improves the contrast of cytoplasm while maintaining others. Then, the contour of cytoplasm is quickly obtained by extraction based on parameter-controlled adaptive attention window. Furthermore, the contour is corrected by concave points matching in order to solve the overlap between leukocytes and impurities. The experiments show the effectiveness of the proposed nucleus saliency model, which achieves average localization accuracy with F1-measure greater than 95%. In addition, the comparison of single leukocyte segmentation accuracy and running time has demonstrated that the proposed segmentation scheme outperforms the former approaches in RSLI. 2014-07-01T07:00:00Z text application/pdf https://ink.library.smu.edu.sg/sis_research/5363 info:doi/10.1016/j.micron.2013.09.006 https://ink.library.smu.edu.sg/context/sis_research/article/6367/viewcontent/leukocyte_micron14.pdf http://creativecommons.org/licenses/by-nc-nd/4.0/ Research Collection School Of Computing and Information Systems eng Institutional Knowledge at Singapore Management University Average absolute difference Cytoplasm enhancement Leukocyte localization Visual attention Software Engineering Theory and Algorithms
institution Singapore Management University
building SMU Libraries
continent Asia
country Singapore
Singapore
content_provider SMU Libraries
collection InK@SMU
language English
topic Average absolute difference
Cytoplasm enhancement
Leukocyte localization
Visual attention
Software Engineering
Theory and Algorithms
spellingShingle Average absolute difference
Cytoplasm enhancement
Leukocyte localization
Visual attention
Software Engineering
Theory and Algorithms
ZHENG, Xin
WANG, Yong
WANG, Guoyou
CHEN, Zhong
A novel algorithm based on visual saliency attention for localization and segmentation in rapidly-stained leukocyte images
description In this paper, we propose a fast hierarchical framework of leukocyte localization and segmentation in rapidly-stained leukocyte images (RSLI) with complex backgrounds and varying illumination. The proposed framework contains two main steps. First, a nucleus saliency model based on average absolute difference is built, which locates each leukocyte precisely while effectively removes dyeing impurities and erythrocyte fragments. Secondly, two different schemes are presented for segmenting the nuclei and cytoplasm respectively. As for nuclei segmentation, to solve the overlap problem between leukocytes, we extract the nucleus lobes first and further group them. The lobes extraction is realized by the histogram-based contrast map and watershed segmentation, taking into account the saliency and similarity of nucleus color. Meanwhile, as for cytoplasm segmentation, to extract the blurry contour of the cytoplasm under instable illumination, we propose a cytoplasm enhancement based on tri-modal histogram specification, which specifically improves the contrast of cytoplasm while maintaining others. Then, the contour of cytoplasm is quickly obtained by extraction based on parameter-controlled adaptive attention window. Furthermore, the contour is corrected by concave points matching in order to solve the overlap between leukocytes and impurities. The experiments show the effectiveness of the proposed nucleus saliency model, which achieves average localization accuracy with F1-measure greater than 95%. In addition, the comparison of single leukocyte segmentation accuracy and running time has demonstrated that the proposed segmentation scheme outperforms the former approaches in RSLI.
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author ZHENG, Xin
WANG, Yong
WANG, Guoyou
CHEN, Zhong
author_facet ZHENG, Xin
WANG, Yong
WANG, Guoyou
CHEN, Zhong
author_sort ZHENG, Xin
title A novel algorithm based on visual saliency attention for localization and segmentation in rapidly-stained leukocyte images
title_short A novel algorithm based on visual saliency attention for localization and segmentation in rapidly-stained leukocyte images
title_full A novel algorithm based on visual saliency attention for localization and segmentation in rapidly-stained leukocyte images
title_fullStr A novel algorithm based on visual saliency attention for localization and segmentation in rapidly-stained leukocyte images
title_full_unstemmed A novel algorithm based on visual saliency attention for localization and segmentation in rapidly-stained leukocyte images
title_sort novel algorithm based on visual saliency attention for localization and segmentation in rapidly-stained leukocyte images
publisher Institutional Knowledge at Singapore Management University
publishDate 2014
url https://ink.library.smu.edu.sg/sis_research/5363
https://ink.library.smu.edu.sg/context/sis_research/article/6367/viewcontent/leukocyte_micron14.pdf
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