Viral Pneumonia screening on chest X-rays using confidence-aware anomaly detection

Clusters of viral pneumonia occurrences over a short period may be a harbinger of an outbreak or pandemic. Rapid and accurate detection of viral pneumonia using chest X-rays can be of significant value for large-scale screening and epidemic prevention, particularly when other more sophisticated imag...

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Main Authors: ZHANG, Jianpeng, XIE, Yutong, PANG, Guansong, LIAO, Zhibin, VERJANS, Johan, LI, Wenxing, SUN, Zongji, HE, Jian, LI, Yi, SHEN, Chunhua, XIA, Yong
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Language:English
Published: Institutional Knowledge at Singapore Management University 2022
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Online Access:https://ink.library.smu.edu.sg/sis_research/7019
https://ink.library.smu.edu.sg/context/sis_research/article/8022/viewcontent/2003.12338.pdf
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spelling sg-smu-ink.sis_research-80222022-03-17T15:05:15Z Viral Pneumonia screening on chest X-rays using confidence-aware anomaly detection ZHANG, Jianpeng XIE, Yutong PANG, Guansong LIAO, Zhibin VERJANS, Johan LI, Wenxing SUN, Zongji HE, Jian LI, Yi SHEN, Chunhua XIA, Yong Clusters of viral pneumonia occurrences over a short period may be a harbinger of an outbreak or pandemic. Rapid and accurate detection of viral pneumonia using chest X-rays can be of significant value for large-scale screening and epidemic prevention, particularly when other more sophisticated imaging modalities are not readily accessible. However, the emergence of novel mutated viruses causes a substantial dataset shift, which can greatly limit the performance of classification-based approaches. In this paper, we formulate the task of differentiating viral pneumonia from non-viral pneumonia and healthy controls into a one-class classification-based anomaly detection problem. We therefore propose the confidence-aware anomaly detection (CAAD) model, which consists of a shared feature extractor, an anomaly detection module, and a confidence prediction module. If the anomaly score produced by the anomaly detection module is large enough, or the confidence score estimated by the confidence prediction module is small enough, the input will be accepted as an anomaly case (i.e., viral pneumonia). The major advantage of our approach over binary classification is that we avoid modeling individual viral pneumonia classes explicitly and treat all known viral pneumonia cases as anomalies to improve the one-class model. The proposed model outperforms binary classification models on the clinical X-VIRAL dataset that contains 5,977 viral pneumonia (no COVID-19) cases, 37,393 non-viral pneumonia or healthy cases. Moreover, when directly testing on the X-COVID dataset that contains 106 COVID-19 cases and 107 normal controls without any fine-tuning, our model achieves an AUC of 83.61% and sensitivity of 71.70%, which is comparable to the performance of radiologists reported in the literature. 2022-03-01T08:00:00Z text application/pdf https://ink.library.smu.edu.sg/sis_research/7019 info:doi/10.1109/TMI.2020.3040950 https://ink.library.smu.edu.sg/context/sis_research/article/8022/viewcontent/2003.12338.pdf http://creativecommons.org/licenses/by-nc-nd/4.0/ Research Collection School Of Computing and Information Systems eng Institutional Knowledge at Singapore Management University Viral pneumonia screening deep anomaly detection confidence prediction chest X-ray Artificial Intelligence and Robotics Health Information Technology
institution Singapore Management University
building SMU Libraries
continent Asia
country Singapore
Singapore
content_provider SMU Libraries
collection InK@SMU
language English
topic Viral pneumonia screening
deep anomaly detection
confidence prediction
chest X-ray
Artificial Intelligence and Robotics
Health Information Technology
spellingShingle Viral pneumonia screening
deep anomaly detection
confidence prediction
chest X-ray
Artificial Intelligence and Robotics
Health Information Technology
ZHANG, Jianpeng
XIE, Yutong
PANG, Guansong
LIAO, Zhibin
VERJANS, Johan
LI, Wenxing
SUN, Zongji
HE, Jian
LI, Yi
SHEN, Chunhua
XIA, Yong
Viral Pneumonia screening on chest X-rays using confidence-aware anomaly detection
description Clusters of viral pneumonia occurrences over a short period may be a harbinger of an outbreak or pandemic. Rapid and accurate detection of viral pneumonia using chest X-rays can be of significant value for large-scale screening and epidemic prevention, particularly when other more sophisticated imaging modalities are not readily accessible. However, the emergence of novel mutated viruses causes a substantial dataset shift, which can greatly limit the performance of classification-based approaches. In this paper, we formulate the task of differentiating viral pneumonia from non-viral pneumonia and healthy controls into a one-class classification-based anomaly detection problem. We therefore propose the confidence-aware anomaly detection (CAAD) model, which consists of a shared feature extractor, an anomaly detection module, and a confidence prediction module. If the anomaly score produced by the anomaly detection module is large enough, or the confidence score estimated by the confidence prediction module is small enough, the input will be accepted as an anomaly case (i.e., viral pneumonia). The major advantage of our approach over binary classification is that we avoid modeling individual viral pneumonia classes explicitly and treat all known viral pneumonia cases as anomalies to improve the one-class model. The proposed model outperforms binary classification models on the clinical X-VIRAL dataset that contains 5,977 viral pneumonia (no COVID-19) cases, 37,393 non-viral pneumonia or healthy cases. Moreover, when directly testing on the X-COVID dataset that contains 106 COVID-19 cases and 107 normal controls without any fine-tuning, our model achieves an AUC of 83.61% and sensitivity of 71.70%, which is comparable to the performance of radiologists reported in the literature.
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author ZHANG, Jianpeng
XIE, Yutong
PANG, Guansong
LIAO, Zhibin
VERJANS, Johan
LI, Wenxing
SUN, Zongji
HE, Jian
LI, Yi
SHEN, Chunhua
XIA, Yong
author_facet ZHANG, Jianpeng
XIE, Yutong
PANG, Guansong
LIAO, Zhibin
VERJANS, Johan
LI, Wenxing
SUN, Zongji
HE, Jian
LI, Yi
SHEN, Chunhua
XIA, Yong
author_sort ZHANG, Jianpeng
title Viral Pneumonia screening on chest X-rays using confidence-aware anomaly detection
title_short Viral Pneumonia screening on chest X-rays using confidence-aware anomaly detection
title_full Viral Pneumonia screening on chest X-rays using confidence-aware anomaly detection
title_fullStr Viral Pneumonia screening on chest X-rays using confidence-aware anomaly detection
title_full_unstemmed Viral Pneumonia screening on chest X-rays using confidence-aware anomaly detection
title_sort viral pneumonia screening on chest x-rays using confidence-aware anomaly detection
publisher Institutional Knowledge at Singapore Management University
publishDate 2022
url https://ink.library.smu.edu.sg/sis_research/7019
https://ink.library.smu.edu.sg/context/sis_research/article/8022/viewcontent/2003.12338.pdf
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