An improved Agrobacterium-mediated transformation system for the functional genetic analysis of Penicillium marneffei

We have developed an improved Agrobacterium-mediated transformation (AMT) system for the functional genetic analysis of Penicillium marneffei, a thermally dimorphic, human pathogenic fungus. Our AMT protocol included the use of conidia or pre-germinated conidia of P. marneffei as the host recipient...

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Main Authors: Aksarakorn Kummasook, Chester R. Cooper, Nongnuch Vanittanakom
Format: Journal
Published: 2018
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http://cmuir.cmu.ac.th/jspui/handle/6653943832/51011
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Institution: Chiang Mai University
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spelling th-cmuir.6653943832-510112018-09-04T04:54:19Z An improved Agrobacterium-mediated transformation system for the functional genetic analysis of Penicillium marneffei Aksarakorn Kummasook Chester R. Cooper Nongnuch Vanittanakom Medicine Veterinary We have developed an improved Agrobacterium-mediated transformation (AMT) system for the functional genetic analysis of Penicillium marneffei, a thermally dimorphic, human pathogenic fungus. Our AMT protocol included the use of conidia or pre-germinated conidia of P. marneffei as the host recipient for T-DNA from Agrobacterium tumefaciens and co-cultivation at 28°C for 36 hours. Bleomycin-resistant transformants were selected as yeast-like colonies following incubation at 37°C. The efficiency of transformation was approximately 123 ± 3.27 and 239 ± 13.12 transformants per plate when using 5 × 104conidia and pre-germinated conidia as starting materials, respectively. Southern blot analysis demonstrated that 95% of transformants contained single copies of T-DNA. Inverse PCR was employed for identifying flanking sequences at the T-DNA insertion sites. Analysis of these sequences indicated that integration occurred as random recombination events. Among the mutants isolated were previously described stuA and gasC defective strains. These AMT-derived mutants possessed single T-DNA integrations within their particular coding sequences. In addition, other morphological and pigmentation mutants possessing a variety of gene-specific defects were isolated, including two mutants having T-DNA integrations within putative promoter regions. One of the latter integration events was accompanied by the deletion of the entire corresponding gene. Collectively, these results indicated that AMT could be used for large-scale, functional genetic analyses in P. marneffei. Such analyses can potentially facilitate the identification of those genetic elements related to morphogenesis, as well as pathogenesis in this medically important fungus. © 2010 ISHAM. 2018-09-04T04:50:00Z 2018-09-04T04:50:00Z 2010-12-01 Journal 14602709 13693786 2-s2.0-77958147226 10.3109/13693781003801219 https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=77958147226&origin=inward http://cmuir.cmu.ac.th/jspui/handle/6653943832/51011
institution Chiang Mai University
building Chiang Mai University Library
country Thailand
collection CMU Intellectual Repository
topic Medicine
Veterinary
spellingShingle Medicine
Veterinary
Aksarakorn Kummasook
Chester R. Cooper
Nongnuch Vanittanakom
An improved Agrobacterium-mediated transformation system for the functional genetic analysis of Penicillium marneffei
description We have developed an improved Agrobacterium-mediated transformation (AMT) system for the functional genetic analysis of Penicillium marneffei, a thermally dimorphic, human pathogenic fungus. Our AMT protocol included the use of conidia or pre-germinated conidia of P. marneffei as the host recipient for T-DNA from Agrobacterium tumefaciens and co-cultivation at 28°C for 36 hours. Bleomycin-resistant transformants were selected as yeast-like colonies following incubation at 37°C. The efficiency of transformation was approximately 123 ± 3.27 and 239 ± 13.12 transformants per plate when using 5 × 104conidia and pre-germinated conidia as starting materials, respectively. Southern blot analysis demonstrated that 95% of transformants contained single copies of T-DNA. Inverse PCR was employed for identifying flanking sequences at the T-DNA insertion sites. Analysis of these sequences indicated that integration occurred as random recombination events. Among the mutants isolated were previously described stuA and gasC defective strains. These AMT-derived mutants possessed single T-DNA integrations within their particular coding sequences. In addition, other morphological and pigmentation mutants possessing a variety of gene-specific defects were isolated, including two mutants having T-DNA integrations within putative promoter regions. One of the latter integration events was accompanied by the deletion of the entire corresponding gene. Collectively, these results indicated that AMT could be used for large-scale, functional genetic analyses in P. marneffei. Such analyses can potentially facilitate the identification of those genetic elements related to morphogenesis, as well as pathogenesis in this medically important fungus. © 2010 ISHAM.
format Journal
author Aksarakorn Kummasook
Chester R. Cooper
Nongnuch Vanittanakom
author_facet Aksarakorn Kummasook
Chester R. Cooper
Nongnuch Vanittanakom
author_sort Aksarakorn Kummasook
title An improved Agrobacterium-mediated transformation system for the functional genetic analysis of Penicillium marneffei
title_short An improved Agrobacterium-mediated transformation system for the functional genetic analysis of Penicillium marneffei
title_full An improved Agrobacterium-mediated transformation system for the functional genetic analysis of Penicillium marneffei
title_fullStr An improved Agrobacterium-mediated transformation system for the functional genetic analysis of Penicillium marneffei
title_full_unstemmed An improved Agrobacterium-mediated transformation system for the functional genetic analysis of Penicillium marneffei
title_sort improved agrobacterium-mediated transformation system for the functional genetic analysis of penicillium marneffei
publishDate 2018
url https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=77958147226&origin=inward
http://cmuir.cmu.ac.th/jspui/handle/6653943832/51011
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