RNA family classification using the conditional random fields model

• Main Authors: Sitthichoke Subpaiboonkit, Chinae Thammarongtham, Jeerayut Chaijaruwanich
• Format: Journal
• Published: 2018
• Subjects: Biochemistry, Genetics and Molecular Biology; Chemistry; Materials Science; Mathematics; Physics and Astronomy
• Online Access: https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84856571106&origin=inward; http://cmuir.cmu.ac.th/jspui/handle/6653943832/51426
• Institution: Chiang Mai University

RNA family classification is one of the neccesary tasks needed to characterize sequenced genomes. RNA families are defined by member sequences which perform the same function in different species. Such functions have a strong relationship with RNA secondary structures but not the primary sequence. T...