Multiple astrovirus MLB1, MLB2, VA2 clades, and classic human astrovirus in children with acute gastroenteritis in Japan

Multiple astrovirus MLB1, MLB2, VA2 clades, and classic human astrovirus in children with acute gastroenteritis in Japan

© 2016 Wiley Periodicals, Inc. This study investigated the genetic variability of astroviruses in children with acute gastroenteritis in Japan in 2012 to 2013. A total of 330 fecal specimens collected from children with diarrhea were tested for astroviruses using RT-PCR and nucleotide sequencing tec...

Full description

Saved in:
Bibliographic Details
Main Authors: Pattara Khamrin, Aksara Thongprachum, Shoko Okitsu, Satoshi Hayakawa, Niwat Maneekarn, Hiroshi Ushijima
Format: Journal
Published: 2018
Subjects:
Immunology and Microbiology
Medicine
Online Access:https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84954388445&origin=inward
http://cmuir.cmu.ac.th/jspui/handle/6653943832/55906
Tags: Add Tag
No Tags, Be the first to tag this record!
Institution: Chiang Mai University
id th-cmuir.6653943832-55906
record_format dspace
spelling th-cmuir.6653943832-559062018-09-05T03:10:27Z Multiple astrovirus MLB1, MLB2, VA2 clades, and classic human astrovirus in children with acute gastroenteritis in Japan Pattara Khamrin Aksara Thongprachum Shoko Okitsu Satoshi Hayakawa Niwat Maneekarn Hiroshi Ushijima Immunology and Microbiology Medicine © 2016 Wiley Periodicals, Inc. This study investigated the genetic variability of astroviruses in children with acute gastroenteritis in Japan in 2012 to 2013. A total of 330 fecal specimens collected from children with diarrhea were tested for astroviruses using RT-PCR and nucleotide sequencing techniques. Among the tested specimens, 54 (16.4%) were positive for astrovirus. Three different phylogenetic clades were detected. MLB was the most predominant clade (35 samples), followed by classic astrovirus (17 samples), and VA astrovirus (2 samples). Two types of MLB were identified (MLB1 and MLB2), while classic astroviruses were HAstV1 and HAstV4. Two VA astroviruses were identified as VA2. 2018-09-05T03:03:35Z 2018-09-05T03:03:35Z 2016-02-01 Journal 10969071 01466615 2-s2.0-84954388445 10.1002/jmv.24337 https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84954388445&origin=inward http://cmuir.cmu.ac.th/jspui/handle/6653943832/55906
institution Chiang Mai University
building Chiang Mai University Library
country Thailand
collection CMU Intellectual Repository
topic Immunology and Microbiology
Medicine
spellingShingle Immunology and Microbiology
Medicine
Pattara Khamrin
Aksara Thongprachum
Shoko Okitsu
Satoshi Hayakawa
Niwat Maneekarn
Hiroshi Ushijima
Multiple astrovirus MLB1, MLB2, VA2 clades, and classic human astrovirus in children with acute gastroenteritis in Japan
description © 2016 Wiley Periodicals, Inc. This study investigated the genetic variability of astroviruses in children with acute gastroenteritis in Japan in 2012 to 2013. A total of 330 fecal specimens collected from children with diarrhea were tested for astroviruses using RT-PCR and nucleotide sequencing techniques. Among the tested specimens, 54 (16.4%) were positive for astrovirus. Three different phylogenetic clades were detected. MLB was the most predominant clade (35 samples), followed by classic astrovirus (17 samples), and VA astrovirus (2 samples). Two types of MLB were identified (MLB1 and MLB2), while classic astroviruses were HAstV1 and HAstV4. Two VA astroviruses were identified as VA2.
format Journal
author Pattara Khamrin
Aksara Thongprachum
Shoko Okitsu
Satoshi Hayakawa
Niwat Maneekarn
Hiroshi Ushijima
author_facet Pattara Khamrin
Aksara Thongprachum
Shoko Okitsu
Satoshi Hayakawa
Niwat Maneekarn
Hiroshi Ushijima
author_sort Pattara Khamrin
title Multiple astrovirus MLB1, MLB2, VA2 clades, and classic human astrovirus in children with acute gastroenteritis in Japan
title_short Multiple astrovirus MLB1, MLB2, VA2 clades, and classic human astrovirus in children with acute gastroenteritis in Japan
title_full Multiple astrovirus MLB1, MLB2, VA2 clades, and classic human astrovirus in children with acute gastroenteritis in Japan
title_fullStr Multiple astrovirus MLB1, MLB2, VA2 clades, and classic human astrovirus in children with acute gastroenteritis in Japan
title_full_unstemmed Multiple astrovirus MLB1, MLB2, VA2 clades, and classic human astrovirus in children with acute gastroenteritis in Japan
title_sort multiple astrovirus mlb1, mlb2, va2 clades, and classic human astrovirus in children with acute gastroenteritis in japan
publishDate 2018
url https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84954388445&origin=inward
http://cmuir.cmu.ac.th/jspui/handle/6653943832/55906
_version_ 1681424592812376064

Similar Items