Two different genogroups of Ehrlichia canis from dogs in Thailand using immunodominant protein genes

© 2018 Elsevier B.V. Ehrlichia canis is the causative agent of canine monocytic ehrlichiosis (CME). While there is a high prevalence of CME in Thailand, genetic diversity of E. canis is still poorly defined. This study examined the molecular characteristics of E. canis using PCR and phylogenetic ana...

Full description

Saved in:
Bibliographic Details
Main Authors: Boondarika Nambooppha, Amarin Rittipornlertrak, Muncharee Tattiyapong, Sahatchai Tangtrongsup, Saruda Tiwananthagorn, Yang Tsung Chung, Nattawooti Sthitmatee
Format: Journal
Published: 2018
Subjects:
Online Access:https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85047763702&origin=inward
http://cmuir.cmu.ac.th/jspui/handle/6653943832/58013
Tags: Add Tag
No Tags, Be the first to tag this record!
Institution: Chiang Mai University
id th-cmuir.6653943832-58013
record_format dspace
spelling th-cmuir.6653943832-580132018-09-05T04:34:00Z Two different genogroups of Ehrlichia canis from dogs in Thailand using immunodominant protein genes Boondarika Nambooppha Amarin Rittipornlertrak Muncharee Tattiyapong Sahatchai Tangtrongsup Saruda Tiwananthagorn Yang Tsung Chung Nattawooti Sthitmatee Agricultural and Biological Sciences Biochemistry, Genetics and Molecular Biology Immunology and Microbiology Medicine © 2018 Elsevier B.V. Ehrlichia canis is the causative agent of canine monocytic ehrlichiosis (CME). While there is a high prevalence of CME in Thailand, genetic diversity of E. canis is still poorly defined. This study examined the molecular characteristics of E. canis using PCR and phylogenetic analysis of the dsb, gp19 and gp36 genes. DNA was extracted from 220 whole blood samples of naturally infected dogs, and all had clinical signs compatible with tick-borne diseases. Of these, 16.4% (36/220) provided positive E. canis DNA via the dsb and gp19 genes. However, only 13 out of the 36 samples (36.1%) were positive for the gp36 gene. Sequences of the dsb gene had very high identity (99–100%) with previously deposited E. canis sequences. Sequences of the gp19 gene were similar to those from US and Taiwanese genogroups (98.8–99.5% identity). Elucidation of genetic characteristics of E. canis based on the gp36 gene displayed 91.4–99.1% shared identity. There were 426–429 bp of a 5′ end pre-repeat tandem region, a 27 bp repetition with variable numbers of a tandem repeat (TR) region of 9 amino acid sequences (TEDSVSAPA), and a variable 3′ end region with sequence length depending on the isolate (72–93 bp). Phylogenetic trees of E. canis, particularly using the gp36 amino acid sequences, showed that the Thai strains fell into two phylogenetic clades contained within other worldwide E. canis strains. Alignment and phylogenetic analysis suggested that E. canis strains from Thailand could be divided into two genogroups, the US and Taiwanese genogroups. This study provides the first characterization of the dsb and gp19 genes of E. canis in Thailand, the results support the conclusion that the gp36 is a potential target for genotyping and elucidation of phylogenetic relationships among E. canis strains. 2018-09-05T04:18:58Z 2018-09-05T04:18:58Z 2018-09-01 Journal 15677257 15671348 2-s2.0-85047763702 10.1016/j.meegid.2018.05.027 https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85047763702&origin=inward http://cmuir.cmu.ac.th/jspui/handle/6653943832/58013
institution Chiang Mai University
building Chiang Mai University Library
country Thailand
collection CMU Intellectual Repository
topic Agricultural and Biological Sciences
Biochemistry, Genetics and Molecular Biology
Immunology and Microbiology
Medicine
spellingShingle Agricultural and Biological Sciences
Biochemistry, Genetics and Molecular Biology
Immunology and Microbiology
Medicine
Boondarika Nambooppha
Amarin Rittipornlertrak
Muncharee Tattiyapong
Sahatchai Tangtrongsup
Saruda Tiwananthagorn
Yang Tsung Chung
Nattawooti Sthitmatee
Two different genogroups of Ehrlichia canis from dogs in Thailand using immunodominant protein genes
description © 2018 Elsevier B.V. Ehrlichia canis is the causative agent of canine monocytic ehrlichiosis (CME). While there is a high prevalence of CME in Thailand, genetic diversity of E. canis is still poorly defined. This study examined the molecular characteristics of E. canis using PCR and phylogenetic analysis of the dsb, gp19 and gp36 genes. DNA was extracted from 220 whole blood samples of naturally infected dogs, and all had clinical signs compatible with tick-borne diseases. Of these, 16.4% (36/220) provided positive E. canis DNA via the dsb and gp19 genes. However, only 13 out of the 36 samples (36.1%) were positive for the gp36 gene. Sequences of the dsb gene had very high identity (99–100%) with previously deposited E. canis sequences. Sequences of the gp19 gene were similar to those from US and Taiwanese genogroups (98.8–99.5% identity). Elucidation of genetic characteristics of E. canis based on the gp36 gene displayed 91.4–99.1% shared identity. There were 426–429 bp of a 5′ end pre-repeat tandem region, a 27 bp repetition with variable numbers of a tandem repeat (TR) region of 9 amino acid sequences (TEDSVSAPA), and a variable 3′ end region with sequence length depending on the isolate (72–93 bp). Phylogenetic trees of E. canis, particularly using the gp36 amino acid sequences, showed that the Thai strains fell into two phylogenetic clades contained within other worldwide E. canis strains. Alignment and phylogenetic analysis suggested that E. canis strains from Thailand could be divided into two genogroups, the US and Taiwanese genogroups. This study provides the first characterization of the dsb and gp19 genes of E. canis in Thailand, the results support the conclusion that the gp36 is a potential target for genotyping and elucidation of phylogenetic relationships among E. canis strains.
format Journal
author Boondarika Nambooppha
Amarin Rittipornlertrak
Muncharee Tattiyapong
Sahatchai Tangtrongsup
Saruda Tiwananthagorn
Yang Tsung Chung
Nattawooti Sthitmatee
author_facet Boondarika Nambooppha
Amarin Rittipornlertrak
Muncharee Tattiyapong
Sahatchai Tangtrongsup
Saruda Tiwananthagorn
Yang Tsung Chung
Nattawooti Sthitmatee
author_sort Boondarika Nambooppha
title Two different genogroups of Ehrlichia canis from dogs in Thailand using immunodominant protein genes
title_short Two different genogroups of Ehrlichia canis from dogs in Thailand using immunodominant protein genes
title_full Two different genogroups of Ehrlichia canis from dogs in Thailand using immunodominant protein genes
title_fullStr Two different genogroups of Ehrlichia canis from dogs in Thailand using immunodominant protein genes
title_full_unstemmed Two different genogroups of Ehrlichia canis from dogs in Thailand using immunodominant protein genes
title_sort two different genogroups of ehrlichia canis from dogs in thailand using immunodominant protein genes
publishDate 2018
url https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85047763702&origin=inward
http://cmuir.cmu.ac.th/jspui/handle/6653943832/58013
_version_ 1681424986005307392