Synonymous codon usage bias dependent on local nucleotide context in the class deinococci

• Main Authors: Robert W. Cutler, Panuwan Chantawannakul
• Format: Journal
• Published: 2018
• Subjects: Agricultural and Biological Sciences; Biochemistry, Genetics and Molecular Biology
• Online Access: https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=51749119885&origin=inward; http://cmuir.cmu.ac.th/jspui/handle/6653943832/60052
• Institution: Chiang Mai University

To study the evolution of mutation biased synonymous codon usage, we examined nucleotide co-occurrence patterns in the Deinococcus radiodurans, D. geothermalis, and Thermus thermophilus genomes for nucleotide replacement dependent on the surrounding nucleotide context. Nucleotides on the third codon...