Taxonomic circumscription of Diaporthales based on multigene phylogeny and morphology

© 2018, School of Science. Demarcation of family, genus and species boundaries in the Diaporthales has been tentative due to uninformative illustrations and descriptions, overlapping morphological characteristics, misplacement or poor condition of type specimens and shortage of molecular data from e...

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Main Authors: Indunil C. Senanayake, Rajesh Jeewon, Putarak Chomnunti, Dhanushka N. Wanasinghe, Chada Norphanphoun, Anuruddha Karunarathna, Dhandevi Pem, Rekhani H. Perera, Erio Camporesi, Eric H.C. McKenzie, Kevin D. Hyde, Samantha C. Karunarathna
Format: Journal
Published: 2018
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http://cmuir.cmu.ac.th/jspui/handle/6653943832/62949
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Institution: Chiang Mai University
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spelling th-cmuir.6653943832-629492018-12-14T03:57:29Z Taxonomic circumscription of Diaporthales based on multigene phylogeny and morphology Indunil C. Senanayake Rajesh Jeewon Putarak Chomnunti Dhanushka N. Wanasinghe Chada Norphanphoun Anuruddha Karunarathna Dhandevi Pem Rekhani H. Perera Erio Camporesi Eric H.C. McKenzie Kevin D. Hyde Samantha C. Karunarathna Agricultural and Biological Sciences Environmental Science © 2018, School of Science. Demarcation of family, genus and species boundaries in the Diaporthales has been tentative due to uninformative illustrations and descriptions, overlapping morphological characteristics, misplacement or poor condition of type specimens and shortage of molecular data from ex-type cultures. In this study, we obtained the type specimens or other authentic specimens of diaporthalean taxa from worldwide fungaria. We examined, described and illustrated them. This study is based on morphological characters from type or authentic specimens, details from protologue and original illustrations and molecular data obtained from GenBank. Combined analyses of nrITS, nrLSU, RPB2 and TEF1-α sequence data were used to construct the molecular phylogeny. Additionally, we provided separate phylogenetic trees for families when necessary to show the generic distribution within these families based on suitable gene markers. Based on morphology and phylogeny, we treat 17 genera previously assigned to Diaporthales genera incertae sedis within several families. For some genera we have designated new generic types as they are lacking type species or type species have affiliations with other families. We exclude Anisomycopsis from Diaporthales and place it in Xylariomycetidae genera incertae sedis. Tirisporellaceae, which was previously placed in Tirisporellales is placed in Diaporthales based on phylogeny and morphology. A new combination, Dendrostoma leiphaemia propose for Amphiporthe leiphaemia (Fr.) Butin. Based on the morphological characters and molecular data we accept 27 families and 138 genera within Diaporthales, 24 genera in Diaporthales genera incertae sedis and one genus in Xylariomycetidae genera incertae sedis. We provide notes for genera in Diaporthales genera incertae sedis, and excluded and doubtful genera are listed with notes on their taxonomy and phylogeny. 2018-12-14T03:43:15Z 2018-12-14T03:43:15Z 2018-11-01 Journal 18789129 15602745 2-s2.0-85057343816 10.1007/s13225-018-0410-z https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85057343816&origin=inward http://cmuir.cmu.ac.th/jspui/handle/6653943832/62949
institution Chiang Mai University
building Chiang Mai University Library
country Thailand
collection CMU Intellectual Repository
topic Agricultural and Biological Sciences
Environmental Science
spellingShingle Agricultural and Biological Sciences
Environmental Science
Indunil C. Senanayake
Rajesh Jeewon
Putarak Chomnunti
Dhanushka N. Wanasinghe
Chada Norphanphoun
Anuruddha Karunarathna
Dhandevi Pem
Rekhani H. Perera
Erio Camporesi
Eric H.C. McKenzie
Kevin D. Hyde
Samantha C. Karunarathna
Taxonomic circumscription of Diaporthales based on multigene phylogeny and morphology
description © 2018, School of Science. Demarcation of family, genus and species boundaries in the Diaporthales has been tentative due to uninformative illustrations and descriptions, overlapping morphological characteristics, misplacement or poor condition of type specimens and shortage of molecular data from ex-type cultures. In this study, we obtained the type specimens or other authentic specimens of diaporthalean taxa from worldwide fungaria. We examined, described and illustrated them. This study is based on morphological characters from type or authentic specimens, details from protologue and original illustrations and molecular data obtained from GenBank. Combined analyses of nrITS, nrLSU, RPB2 and TEF1-α sequence data were used to construct the molecular phylogeny. Additionally, we provided separate phylogenetic trees for families when necessary to show the generic distribution within these families based on suitable gene markers. Based on morphology and phylogeny, we treat 17 genera previously assigned to Diaporthales genera incertae sedis within several families. For some genera we have designated new generic types as they are lacking type species or type species have affiliations with other families. We exclude Anisomycopsis from Diaporthales and place it in Xylariomycetidae genera incertae sedis. Tirisporellaceae, which was previously placed in Tirisporellales is placed in Diaporthales based on phylogeny and morphology. A new combination, Dendrostoma leiphaemia propose for Amphiporthe leiphaemia (Fr.) Butin. Based on the morphological characters and molecular data we accept 27 families and 138 genera within Diaporthales, 24 genera in Diaporthales genera incertae sedis and one genus in Xylariomycetidae genera incertae sedis. We provide notes for genera in Diaporthales genera incertae sedis, and excluded and doubtful genera are listed with notes on their taxonomy and phylogeny.
format Journal
author Indunil C. Senanayake
Rajesh Jeewon
Putarak Chomnunti
Dhanushka N. Wanasinghe
Chada Norphanphoun
Anuruddha Karunarathna
Dhandevi Pem
Rekhani H. Perera
Erio Camporesi
Eric H.C. McKenzie
Kevin D. Hyde
Samantha C. Karunarathna
author_facet Indunil C. Senanayake
Rajesh Jeewon
Putarak Chomnunti
Dhanushka N. Wanasinghe
Chada Norphanphoun
Anuruddha Karunarathna
Dhandevi Pem
Rekhani H. Perera
Erio Camporesi
Eric H.C. McKenzie
Kevin D. Hyde
Samantha C. Karunarathna
author_sort Indunil C. Senanayake
title Taxonomic circumscription of Diaporthales based on multigene phylogeny and morphology
title_short Taxonomic circumscription of Diaporthales based on multigene phylogeny and morphology
title_full Taxonomic circumscription of Diaporthales based on multigene phylogeny and morphology
title_fullStr Taxonomic circumscription of Diaporthales based on multigene phylogeny and morphology
title_full_unstemmed Taxonomic circumscription of Diaporthales based on multigene phylogeny and morphology
title_sort taxonomic circumscription of diaporthales based on multigene phylogeny and morphology
publishDate 2018
url https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85057343816&origin=inward
http://cmuir.cmu.ac.th/jspui/handle/6653943832/62949
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