Divergence time calibrations for ancient lineages of Ascomycota classification based on a modern review of estimations

© 2019, School of Science. Inaccurate taxonomic placement of fossils can lead to the accumulation of errors in molecular clock studies and their generated evolutionary lineages. There are limited fossil data that can be used in divergence time estimations. Therefore, reliable morphological character...

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Main Authors: Milan C. Samarakoon, Kevin D. Hyde, Sinang Hongsanan, Eric H.C. McKenzie, Hiran A. Ariyawansa, Itthayakorn Promputtha, Xiang Yu Zeng, Qing Tian, Jian Kui (Jack) Liu
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Published: 2019
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http://cmuir.cmu.ac.th/jspui/handle/6653943832/65267
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spelling th-cmuir.6653943832-652672019-08-05T04:37:37Z Divergence time calibrations for ancient lineages of Ascomycota classification based on a modern review of estimations Milan C. Samarakoon Kevin D. Hyde Sinang Hongsanan Eric H.C. McKenzie Hiran A. Ariyawansa Itthayakorn Promputtha Xiang Yu Zeng Qing Tian Jian Kui (Jack) Liu Agricultural and Biological Sciences Environmental Science © 2019, School of Science. Inaccurate taxonomic placement of fossils can lead to the accumulation of errors in molecular clock studies and their generated evolutionary lineages. There are limited fossil data that can be used in divergence time estimations. Therefore, reliable morphological characterization and taxonomical identification of fossil fungi are extremely important. Most fossils of Dothideomycetes and Sordariomycetes are from the early Cenozoic (66–23 Mya), with fewer from the late Mesozoic (174–145 Mya). However, it is hard to distinguish some fossil descriptions as photographs and illustrations are unclear; thus, the validity of using these fossils in calibrations of molecular clocks is problematic. This study brings scattered paleobiological data on selected fossil Ascomycota, using descriptions, fossil images and illustrations, coupled with recent age estimations, and taxonomic and phylogenetic affinity of extant species. As an integrated approach, this study summarizes a historical fossil outline with a reliable minimum age for 16 calibrating points viz. crown of Aigialus, Anzia, Aspergillus, Asterina, Calicium chlorosporum–C. nobile, Capnodiales, Chaenotheca, Colletotrichum, Diaporthales, Meliola, Ophiocordyceps, Microthyriales, Microthyrium, Muyocopron, Pezizomycotina and Stigmatomyces. A scheme of Ascomycota ancient lineages is also provided in order to improve divergence time estimations. 2019-08-05T04:31:06Z 2019-08-05T04:31:06Z 2019-05-01 Journal 18789129 15602745 2-s2.0-85064831249 10.1007/s13225-019-00423-8 https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85064831249&origin=inward http://cmuir.cmu.ac.th/jspui/handle/6653943832/65267
institution Chiang Mai University
building Chiang Mai University Library
country Thailand
collection CMU Intellectual Repository
topic Agricultural and Biological Sciences
Environmental Science
spellingShingle Agricultural and Biological Sciences
Environmental Science
Milan C. Samarakoon
Kevin D. Hyde
Sinang Hongsanan
Eric H.C. McKenzie
Hiran A. Ariyawansa
Itthayakorn Promputtha
Xiang Yu Zeng
Qing Tian
Jian Kui (Jack) Liu
Divergence time calibrations for ancient lineages of Ascomycota classification based on a modern review of estimations
description © 2019, School of Science. Inaccurate taxonomic placement of fossils can lead to the accumulation of errors in molecular clock studies and their generated evolutionary lineages. There are limited fossil data that can be used in divergence time estimations. Therefore, reliable morphological characterization and taxonomical identification of fossil fungi are extremely important. Most fossils of Dothideomycetes and Sordariomycetes are from the early Cenozoic (66–23 Mya), with fewer from the late Mesozoic (174–145 Mya). However, it is hard to distinguish some fossil descriptions as photographs and illustrations are unclear; thus, the validity of using these fossils in calibrations of molecular clocks is problematic. This study brings scattered paleobiological data on selected fossil Ascomycota, using descriptions, fossil images and illustrations, coupled with recent age estimations, and taxonomic and phylogenetic affinity of extant species. As an integrated approach, this study summarizes a historical fossil outline with a reliable minimum age for 16 calibrating points viz. crown of Aigialus, Anzia, Aspergillus, Asterina, Calicium chlorosporum–C. nobile, Capnodiales, Chaenotheca, Colletotrichum, Diaporthales, Meliola, Ophiocordyceps, Microthyriales, Microthyrium, Muyocopron, Pezizomycotina and Stigmatomyces. A scheme of Ascomycota ancient lineages is also provided in order to improve divergence time estimations.
format Journal
author Milan C. Samarakoon
Kevin D. Hyde
Sinang Hongsanan
Eric H.C. McKenzie
Hiran A. Ariyawansa
Itthayakorn Promputtha
Xiang Yu Zeng
Qing Tian
Jian Kui (Jack) Liu
author_facet Milan C. Samarakoon
Kevin D. Hyde
Sinang Hongsanan
Eric H.C. McKenzie
Hiran A. Ariyawansa
Itthayakorn Promputtha
Xiang Yu Zeng
Qing Tian
Jian Kui (Jack) Liu
author_sort Milan C. Samarakoon
title Divergence time calibrations for ancient lineages of Ascomycota classification based on a modern review of estimations
title_short Divergence time calibrations for ancient lineages of Ascomycota classification based on a modern review of estimations
title_full Divergence time calibrations for ancient lineages of Ascomycota classification based on a modern review of estimations
title_fullStr Divergence time calibrations for ancient lineages of Ascomycota classification based on a modern review of estimations
title_full_unstemmed Divergence time calibrations for ancient lineages of Ascomycota classification based on a modern review of estimations
title_sort divergence time calibrations for ancient lineages of ascomycota classification based on a modern review of estimations
publishDate 2019
url https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85064831249&origin=inward
http://cmuir.cmu.ac.th/jspui/handle/6653943832/65267
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