Notes, outline and divergence times of Basidiomycota
© 2019, The Author(s). The Basidiomycota constitutes a major phylum of the kingdom Fungi and is second in species numbers to the Ascomycota. The present work provides an overview of all validly published, currently used basidiomycete genera to date in a single document. An outline of all genera of B...
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th-cmuir.6653943832-675172020-04-02T15:06:57Z Notes, outline and divergence times of Basidiomycota Mao Qiang He Rui Lin Zhao Kevin D. Hyde Dominik Begerow Martin Kemler Andrey Yurkov Eric H.C. McKenzie Olivier Raspé Makoto Kakishima Santiago Sánchez-Ramírez Else C. Vellinga Roy Halling Viktor Papp Ivan V. Zmitrovich Bart Buyck Damien Ertz Nalin N. Wijayawardene Bao Kai Cui Nathan Schoutteten Xin Zhan Liu Tai Hui Li Yi Jian Yao Xin Yu Zhu An Qi Liu Guo Jie Li Ming Zhe Zhang Zhi Lin Ling Bin Cao Vladimír Antonín Teun Boekhout Bianca Denise Barbosa da Silva Eske De Crop Cony Decock Bálint Dima Arun Kumar Dutta Jack W. Fell József Geml Masoomeh Ghobad-Nejhad Admir J. Giachini Tatiana B. Gibertoni Sergio P. Gorjón Danny Haelewaters Shuang Hui He Brendan P. Hodkinson Egon Horak Tamotsu Hoshino Alfredo Justo Young Woon Lim Nelson Menolli Armin Mešić Jean Marc Moncalvo Gregory M. Mueller László G. Nagy R. Henrik Nilsson Machiel Noordeloos Jorinde Nuytinck Takamichi Orihara Cheewangkoon Ratchadawan Mario Rajchenberg Alexandre G.S. Silva-Filho Marcelo Aloisio Sulzbacher Zdenko Tkalčec Ricardo Valenzuela Annemieke Verbeken Alfredo Vizzini Felipe Wartchow Tie Zheng Wei Michael Weiß Chang Lin Zhao Paul M. Kirk Agricultural and Biological Sciences Environmental Science © 2019, The Author(s). The Basidiomycota constitutes a major phylum of the kingdom Fungi and is second in species numbers to the Ascomycota. The present work provides an overview of all validly published, currently used basidiomycete genera to date in a single document. An outline of all genera of Basidiomycota is provided, which includes 1928 currently used genera names, with 1263 synonyms, which are distributed in 241 families, 68 orders, 18 classes and four subphyla. We provide brief notes for each accepted genus including information on classification, number of accepted species, type species, life mode, habitat, distribution, and sequence information. Furthermore, three phylogenetic analyses with combined LSU, SSU, 5.8s, rpb1, rpb2, and ef1 datasets for the subphyla Agaricomycotina, Pucciniomycotina and Ustilaginomycotina are conducted, respectively. Divergence time estimates are provided to the family level with 632 species from 62 orders, 168 families and 605 genera. Our study indicates that the divergence times of the subphyla in Basidiomycota are 406–430 Mya, classes are 211–383 Mya, and orders are 99–323 Mya, which are largely consistent with previous studies. In this study, all phylogenetically supported families were dated, with the families of Agaricomycotina diverging from 27–178 Mya, Pucciniomycotina from 85–222 Mya, and Ustilaginomycotina from 79–177 Mya. Divergence times as additional criterion in ranking provide additional evidence to resolve taxonomic problems in the Basidiomycota taxonomic system, and also provide a better understanding of theirphylogeny and evolution. 2020-04-02T14:54:01Z 2020-04-02T14:54:01Z 2019-11-01 Journal 18789129 15602745 2-s2.0-85075880778 10.1007/s13225-019-00435-4 https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85075880778&origin=inward http://cmuir.cmu.ac.th/jspui/handle/6653943832/67517 |
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Agricultural and Biological Sciences Environmental Science Mao Qiang He Rui Lin Zhao Kevin D. Hyde Dominik Begerow Martin Kemler Andrey Yurkov Eric H.C. McKenzie Olivier Raspé Makoto Kakishima Santiago Sánchez-Ramírez Else C. Vellinga Roy Halling Viktor Papp Ivan V. Zmitrovich Bart Buyck Damien Ertz Nalin N. Wijayawardene Bao Kai Cui Nathan Schoutteten Xin Zhan Liu Tai Hui Li Yi Jian Yao Xin Yu Zhu An Qi Liu Guo Jie Li Ming Zhe Zhang Zhi Lin Ling Bin Cao Vladimír Antonín Teun Boekhout Bianca Denise Barbosa da Silva Eske De Crop Cony Decock Bálint Dima Arun Kumar Dutta Jack W. Fell József Geml Masoomeh Ghobad-Nejhad Admir J. Giachini Tatiana B. Gibertoni Sergio P. Gorjón Danny Haelewaters Shuang Hui He Brendan P. Hodkinson Egon Horak Tamotsu Hoshino Alfredo Justo Young Woon Lim Nelson Menolli Armin Mešić Jean Marc Moncalvo Gregory M. Mueller László G. Nagy R. Henrik Nilsson Machiel Noordeloos Jorinde Nuytinck Takamichi Orihara Cheewangkoon Ratchadawan Mario Rajchenberg Alexandre G.S. Silva-Filho Marcelo Aloisio Sulzbacher Zdenko Tkalčec Ricardo Valenzuela Annemieke Verbeken Alfredo Vizzini Felipe Wartchow Tie Zheng Wei Michael Weiß Chang Lin Zhao Paul M. Kirk Notes, outline and divergence times of Basidiomycota |
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© 2019, The Author(s). The Basidiomycota constitutes a major phylum of the kingdom Fungi and is second in species numbers to the Ascomycota. The present work provides an overview of all validly published, currently used basidiomycete genera to date in a single document. An outline of all genera of Basidiomycota is provided, which includes 1928 currently used genera names, with 1263 synonyms, which are distributed in 241 families, 68 orders, 18 classes and four subphyla. We provide brief notes for each accepted genus including information on classification, number of accepted species, type species, life mode, habitat, distribution, and sequence information. Furthermore, three phylogenetic analyses with combined LSU, SSU, 5.8s, rpb1, rpb2, and ef1 datasets for the subphyla Agaricomycotina, Pucciniomycotina and Ustilaginomycotina are conducted, respectively. Divergence time estimates are provided to the family level with 632 species from 62 orders, 168 families and 605 genera. Our study indicates that the divergence times of the subphyla in Basidiomycota are 406–430 Mya, classes are 211–383 Mya, and orders are 99–323 Mya, which are largely consistent with previous studies. In this study, all phylogenetically supported families were dated, with the families of Agaricomycotina diverging from 27–178 Mya, Pucciniomycotina from 85–222 Mya, and Ustilaginomycotina from 79–177 Mya. Divergence times as additional criterion in ranking provide additional evidence to resolve taxonomic problems in the Basidiomycota taxonomic system, and also provide a better understanding of theirphylogeny and evolution. |
format |
Journal |
author |
Mao Qiang He Rui Lin Zhao Kevin D. Hyde Dominik Begerow Martin Kemler Andrey Yurkov Eric H.C. McKenzie Olivier Raspé Makoto Kakishima Santiago Sánchez-Ramírez Else C. Vellinga Roy Halling Viktor Papp Ivan V. Zmitrovich Bart Buyck Damien Ertz Nalin N. Wijayawardene Bao Kai Cui Nathan Schoutteten Xin Zhan Liu Tai Hui Li Yi Jian Yao Xin Yu Zhu An Qi Liu Guo Jie Li Ming Zhe Zhang Zhi Lin Ling Bin Cao Vladimír Antonín Teun Boekhout Bianca Denise Barbosa da Silva Eske De Crop Cony Decock Bálint Dima Arun Kumar Dutta Jack W. Fell József Geml Masoomeh Ghobad-Nejhad Admir J. Giachini Tatiana B. Gibertoni Sergio P. Gorjón Danny Haelewaters Shuang Hui He Brendan P. Hodkinson Egon Horak Tamotsu Hoshino Alfredo Justo Young Woon Lim Nelson Menolli Armin Mešić Jean Marc Moncalvo Gregory M. Mueller László G. Nagy R. Henrik Nilsson Machiel Noordeloos Jorinde Nuytinck Takamichi Orihara Cheewangkoon Ratchadawan Mario Rajchenberg Alexandre G.S. Silva-Filho Marcelo Aloisio Sulzbacher Zdenko Tkalčec Ricardo Valenzuela Annemieke Verbeken Alfredo Vizzini Felipe Wartchow Tie Zheng Wei Michael Weiß Chang Lin Zhao Paul M. Kirk |
author_facet |
Mao Qiang He Rui Lin Zhao Kevin D. Hyde Dominik Begerow Martin Kemler Andrey Yurkov Eric H.C. McKenzie Olivier Raspé Makoto Kakishima Santiago Sánchez-Ramírez Else C. Vellinga Roy Halling Viktor Papp Ivan V. Zmitrovich Bart Buyck Damien Ertz Nalin N. Wijayawardene Bao Kai Cui Nathan Schoutteten Xin Zhan Liu Tai Hui Li Yi Jian Yao Xin Yu Zhu An Qi Liu Guo Jie Li Ming Zhe Zhang Zhi Lin Ling Bin Cao Vladimír Antonín Teun Boekhout Bianca Denise Barbosa da Silva Eske De Crop Cony Decock Bálint Dima Arun Kumar Dutta Jack W. Fell József Geml Masoomeh Ghobad-Nejhad Admir J. Giachini Tatiana B. Gibertoni Sergio P. Gorjón Danny Haelewaters Shuang Hui He Brendan P. Hodkinson Egon Horak Tamotsu Hoshino Alfredo Justo Young Woon Lim Nelson Menolli Armin Mešić Jean Marc Moncalvo Gregory M. Mueller László G. Nagy R. Henrik Nilsson Machiel Noordeloos Jorinde Nuytinck Takamichi Orihara Cheewangkoon Ratchadawan Mario Rajchenberg Alexandre G.S. Silva-Filho Marcelo Aloisio Sulzbacher Zdenko Tkalčec Ricardo Valenzuela Annemieke Verbeken Alfredo Vizzini Felipe Wartchow Tie Zheng Wei Michael Weiß Chang Lin Zhao Paul M. Kirk |
author_sort |
Mao Qiang He |
title |
Notes, outline and divergence times of Basidiomycota |
title_short |
Notes, outline and divergence times of Basidiomycota |
title_full |
Notes, outline and divergence times of Basidiomycota |
title_fullStr |
Notes, outline and divergence times of Basidiomycota |
title_full_unstemmed |
Notes, outline and divergence times of Basidiomycota |
title_sort |
notes, outline and divergence times of basidiomycota |
publishDate |
2020 |
url |
https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85075880778&origin=inward http://cmuir.cmu.ac.th/jspui/handle/6653943832/67517 |
_version_ |
1681426650079690752 |