Direct blood PCR in combination with nucleic acid lateral flow immunoassay for detection of Plasmodium species in settings where malaria is endemic

Declining malaria transmission and known difficulties with current diagnostic tools for malaria, su ch as microscopy and rapid diagnostic tests (RDTs) in particular at low parasite densities, still warrant the search for sensitive diagnostic tests. Molecular tests need substantial simplification bef...

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Main Authors: P. F. Mens, H. M. De Bes, P. Sondo, N. Laochan, L. Keereecharoen, A. Van Amerongen, J. Flint, J. R.S. Sak, S. Proux, H. Tinto, H. D.F.H. Schallig
Other Authors: Royal Tropical Institute - KIT
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Published: 2018
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Online Access:https://repository.li.mahidol.ac.th/handle/123456789/14579
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spelling th-mahidol.145792018-06-11T12:03:01Z Direct blood PCR in combination with nucleic acid lateral flow immunoassay for detection of Plasmodium species in settings where malaria is endemic P. F. Mens H. M. De Bes P. Sondo N. Laochan L. Keereecharoen A. Van Amerongen J. Flint J. R.S. Sak S. Proux H. Tinto H. D.F.H. Schallig Royal Tropical Institute - KIT Institut de Recherche en Sciences de la Santé Shoklo Malaria Research Unit Mahidol University Wageningen University and Research Centre FORSITE DIAGNOSTICS LTD Medicine Declining malaria transmission and known difficulties with current diagnostic tools for malaria, su ch as microscopy and rapid diagnostic tests (RDTs) in particular at low parasite densities, still warrant the search for sensitive diagnostic tests. Molecular tests need substantial simplification before implementation in clinical settings in countries where malaria is endemic. Direct blood PCR (db-PCR), circumventing DNA extraction, to detect Plasmodium was developed and adapted to be visualized by nucleic acid lateral flow immunoassay (NALFIA). The assay was evaluated in the laboratory against samples from confirmed Sudanese patients (n = 51), returning travelers (n = 214), samples from the Dutch Blood Bank (n = 100), and in the field in Burkina Faso (n = 283) and Thailand (n = 381) on suspected malaria cases and compared to RDT and microscopy. The sensitivity and specificity of db-PCR-NALFIA compared to the initial diagnosis in the laboratory were 94.4% (95% confidence interval [CI] = 0.909 to 0.969) and 97.4% (95% CI = 0.909 to 0.969), respectively. In Burkina Faso, the sensitivity was 94.8% (95% CI = 0.88.7 to 97.9%), and the specificity was 82.4% (95% CI = 75.4 to 87.7%) compared to microscopy and 93.3% (95% CI = 87.4 to 96.7%) and 91.4% (95% CI = 85.2 to 95.3%) compared to RDT. In Thailand, the sensitivity and specificity were 93.4% (CI = 86.4 to 97.1%) and 90.9 (95% CI = 86.7 to 93.9%), respectively, compared to microscopy and 95.6% (95% CI = 88.5 to 98.6%) and 87.1% (95% CI = 82.5 to 90.6) compared to RDT. db-PCR-NALFIA is highly sensitive and specific for easy and rapid detection of Plasmodium parasites and can be easily used in countries where malaria is endemic. The inability of the device to discriminate Plasmodium species requires further investigation. Copyright © 2012, American Society for Microbiology. All Rights Reserved. 2018-06-11T05:03:01Z 2018-06-11T05:03:01Z 2012-11-01 Article Journal of Clinical Microbiology. Vol.50, No.11 (2012), 3520-3525 10.1128/JCM.01426-12 1098660X 00951137 2-s2.0-84867500675 https://repository.li.mahidol.ac.th/handle/123456789/14579 Mahidol University SCOPUS https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84867500675&origin=inward
institution Mahidol University
building Mahidol University Library
continent Asia
country Thailand
Thailand
content_provider Mahidol University Library
collection Mahidol University Institutional Repository
topic Medicine
spellingShingle Medicine
P. F. Mens
H. M. De Bes
P. Sondo
N. Laochan
L. Keereecharoen
A. Van Amerongen
J. Flint
J. R.S. Sak
S. Proux
H. Tinto
H. D.F.H. Schallig
Direct blood PCR in combination with nucleic acid lateral flow immunoassay for detection of Plasmodium species in settings where malaria is endemic
description Declining malaria transmission and known difficulties with current diagnostic tools for malaria, su ch as microscopy and rapid diagnostic tests (RDTs) in particular at low parasite densities, still warrant the search for sensitive diagnostic tests. Molecular tests need substantial simplification before implementation in clinical settings in countries where malaria is endemic. Direct blood PCR (db-PCR), circumventing DNA extraction, to detect Plasmodium was developed and adapted to be visualized by nucleic acid lateral flow immunoassay (NALFIA). The assay was evaluated in the laboratory against samples from confirmed Sudanese patients (n = 51), returning travelers (n = 214), samples from the Dutch Blood Bank (n = 100), and in the field in Burkina Faso (n = 283) and Thailand (n = 381) on suspected malaria cases and compared to RDT and microscopy. The sensitivity and specificity of db-PCR-NALFIA compared to the initial diagnosis in the laboratory were 94.4% (95% confidence interval [CI] = 0.909 to 0.969) and 97.4% (95% CI = 0.909 to 0.969), respectively. In Burkina Faso, the sensitivity was 94.8% (95% CI = 0.88.7 to 97.9%), and the specificity was 82.4% (95% CI = 75.4 to 87.7%) compared to microscopy and 93.3% (95% CI = 87.4 to 96.7%) and 91.4% (95% CI = 85.2 to 95.3%) compared to RDT. In Thailand, the sensitivity and specificity were 93.4% (CI = 86.4 to 97.1%) and 90.9 (95% CI = 86.7 to 93.9%), respectively, compared to microscopy and 95.6% (95% CI = 88.5 to 98.6%) and 87.1% (95% CI = 82.5 to 90.6) compared to RDT. db-PCR-NALFIA is highly sensitive and specific for easy and rapid detection of Plasmodium parasites and can be easily used in countries where malaria is endemic. The inability of the device to discriminate Plasmodium species requires further investigation. Copyright © 2012, American Society for Microbiology. All Rights Reserved.
author2 Royal Tropical Institute - KIT
author_facet Royal Tropical Institute - KIT
P. F. Mens
H. M. De Bes
P. Sondo
N. Laochan
L. Keereecharoen
A. Van Amerongen
J. Flint
J. R.S. Sak
S. Proux
H. Tinto
H. D.F.H. Schallig
format Article
author P. F. Mens
H. M. De Bes
P. Sondo
N. Laochan
L. Keereecharoen
A. Van Amerongen
J. Flint
J. R.S. Sak
S. Proux
H. Tinto
H. D.F.H. Schallig
author_sort P. F. Mens
title Direct blood PCR in combination with nucleic acid lateral flow immunoassay for detection of Plasmodium species in settings where malaria is endemic
title_short Direct blood PCR in combination with nucleic acid lateral flow immunoassay for detection of Plasmodium species in settings where malaria is endemic
title_full Direct blood PCR in combination with nucleic acid lateral flow immunoassay for detection of Plasmodium species in settings where malaria is endemic
title_fullStr Direct blood PCR in combination with nucleic acid lateral flow immunoassay for detection of Plasmodium species in settings where malaria is endemic
title_full_unstemmed Direct blood PCR in combination with nucleic acid lateral flow immunoassay for detection of Plasmodium species in settings where malaria is endemic
title_sort direct blood pcr in combination with nucleic acid lateral flow immunoassay for detection of plasmodium species in settings where malaria is endemic
publishDate 2018
url https://repository.li.mahidol.ac.th/handle/123456789/14579
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