Evaluation of real-time polymerase chain reaction for detection of the 16s ribosomal RNA gene of mycobacterium tuberculosis and the diagnosis of cervical tuberculous lymphadenitis in a country with a high tuberculosis incidence

Background.Tuberculous lymphadenitis (TBL) is the most common form of extrapulmonary tuberculosis. Currently, the standard diagnostic test for TBL is culture, which takes more than several weeks to yield results. We studied a real-time polymerase chain reaction (PCR) for rapid detection of Mycobacte...

Full description

Saved in:
Bibliographic Details
Main Authors: Patcharasarn Linasmita, Suthan Srisangkaew, Thanwa Wongsuk, Thongchai Bhongmakapat, Siriorn P. Watcharananan
Other Authors: Srinakharinwirot University
Format: Article
Published: 2018
Subjects:
Online Access:https://repository.li.mahidol.ac.th/handle/123456789/14708
Tags: Add Tag
No Tags, Be the first to tag this record!
Institution: Mahidol University
id th-mahidol.14708
record_format dspace
spelling th-mahidol.147082018-06-11T12:07:13Z Evaluation of real-time polymerase chain reaction for detection of the 16s ribosomal RNA gene of mycobacterium tuberculosis and the diagnosis of cervical tuberculous lymphadenitis in a country with a high tuberculosis incidence Patcharasarn Linasmita Suthan Srisangkaew Thanwa Wongsuk Thongchai Bhongmakapat Siriorn P. Watcharananan Srinakharinwirot University Mahidol University Medicine Background.Tuberculous lymphadenitis (TBL) is the most common form of extrapulmonary tuberculosis. Currently, the standard diagnostic test for TBL is culture, which takes more than several weeks to yield results. We studied a real-time polymerase chain reaction (PCR) for rapid detection of Mycobacterium tuberculosis in cervical lymph node specimens obtained from patients in a country where the tuberculosis incidence is high.Methods.Patients with cervical lymphadenopathy were prospectively enrolled between April 2009 and March 2010. Clinical specimens obtained through fine-needle aspiration (FNA) and excisional biopsy were tested for M. tuberculosis by the COBAS TaqMan MTB Test, a real-time PCR assay for detecting the 16S ribosomal RNA gene of M. tuberculosis. Mycobacterial culture and histopathological findings from tissue biopsy specimens were used as a reference standard for sensitivity and specificity calculations.Results.Of 73 patients, 41 received a diagnosis of TBL. For biopsy specimens, the sensitivity of real-time PCR was 63.4, and the specificity was 96.9. For FNA specimens, the sensitivity was 17.1, and the specificity was 100. The sensitivity of real-time PCR of biopsy specimens was comparable to that of tissue culture but significant lower than that of histopathological examination (P < . 01).Conclusions.Real-time PCR did not increase the yield for rapid diagnosis of TBL. © 2012 The Author. 2018-06-11T05:07:13Z 2018-06-11T05:07:13Z 2012-08-01 Article Clinical Infectious Diseases. Vol.55, No.3 (2012), 313-321 10.1093/cid/cis401 15376591 10584838 2-s2.0-84863924847 https://repository.li.mahidol.ac.th/handle/123456789/14708 Mahidol University SCOPUS https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84863924847&origin=inward
institution Mahidol University
building Mahidol University Library
continent Asia
country Thailand
Thailand
content_provider Mahidol University Library
collection Mahidol University Institutional Repository
topic Medicine
spellingShingle Medicine
Patcharasarn Linasmita
Suthan Srisangkaew
Thanwa Wongsuk
Thongchai Bhongmakapat
Siriorn P. Watcharananan
Evaluation of real-time polymerase chain reaction for detection of the 16s ribosomal RNA gene of mycobacterium tuberculosis and the diagnosis of cervical tuberculous lymphadenitis in a country with a high tuberculosis incidence
description Background.Tuberculous lymphadenitis (TBL) is the most common form of extrapulmonary tuberculosis. Currently, the standard diagnostic test for TBL is culture, which takes more than several weeks to yield results. We studied a real-time polymerase chain reaction (PCR) for rapid detection of Mycobacterium tuberculosis in cervical lymph node specimens obtained from patients in a country where the tuberculosis incidence is high.Methods.Patients with cervical lymphadenopathy were prospectively enrolled between April 2009 and March 2010. Clinical specimens obtained through fine-needle aspiration (FNA) and excisional biopsy were tested for M. tuberculosis by the COBAS TaqMan MTB Test, a real-time PCR assay for detecting the 16S ribosomal RNA gene of M. tuberculosis. Mycobacterial culture and histopathological findings from tissue biopsy specimens were used as a reference standard for sensitivity and specificity calculations.Results.Of 73 patients, 41 received a diagnosis of TBL. For biopsy specimens, the sensitivity of real-time PCR was 63.4, and the specificity was 96.9. For FNA specimens, the sensitivity was 17.1, and the specificity was 100. The sensitivity of real-time PCR of biopsy specimens was comparable to that of tissue culture but significant lower than that of histopathological examination (P < . 01).Conclusions.Real-time PCR did not increase the yield for rapid diagnosis of TBL. © 2012 The Author.
author2 Srinakharinwirot University
author_facet Srinakharinwirot University
Patcharasarn Linasmita
Suthan Srisangkaew
Thanwa Wongsuk
Thongchai Bhongmakapat
Siriorn P. Watcharananan
format Article
author Patcharasarn Linasmita
Suthan Srisangkaew
Thanwa Wongsuk
Thongchai Bhongmakapat
Siriorn P. Watcharananan
author_sort Patcharasarn Linasmita
title Evaluation of real-time polymerase chain reaction for detection of the 16s ribosomal RNA gene of mycobacterium tuberculosis and the diagnosis of cervical tuberculous lymphadenitis in a country with a high tuberculosis incidence
title_short Evaluation of real-time polymerase chain reaction for detection of the 16s ribosomal RNA gene of mycobacterium tuberculosis and the diagnosis of cervical tuberculous lymphadenitis in a country with a high tuberculosis incidence
title_full Evaluation of real-time polymerase chain reaction for detection of the 16s ribosomal RNA gene of mycobacterium tuberculosis and the diagnosis of cervical tuberculous lymphadenitis in a country with a high tuberculosis incidence
title_fullStr Evaluation of real-time polymerase chain reaction for detection of the 16s ribosomal RNA gene of mycobacterium tuberculosis and the diagnosis of cervical tuberculous lymphadenitis in a country with a high tuberculosis incidence
title_full_unstemmed Evaluation of real-time polymerase chain reaction for detection of the 16s ribosomal RNA gene of mycobacterium tuberculosis and the diagnosis of cervical tuberculous lymphadenitis in a country with a high tuberculosis incidence
title_sort evaluation of real-time polymerase chain reaction for detection of the 16s ribosomal rna gene of mycobacterium tuberculosis and the diagnosis of cervical tuberculous lymphadenitis in a country with a high tuberculosis incidence
publishDate 2018
url https://repository.li.mahidol.ac.th/handle/123456789/14708
_version_ 1763493077051244544