Dried blood spots for the diagnosis and quantitation of HIV-1: Stability studies and evaluation of sensitivity and specificity for the diagnosis of infant HIV-1 infection in Thailand
Molecular methods for HIV-1 infection using dried blood-spot (DBS) for HIV-1 CRF01_AE subtypes have not been fully optimized. In this study assays for HIV-1 diagnosis or quantitation were evaluated using infant DBS from Thailand. Paired DBS and whole blood samples from 56 HIV-1 CRF01_AE or B'-i...
Saved in:
Main Authors: | , , , , , , , , , , |
---|---|
Other Authors: | |
Format: | Article |
Published: |
2018
|
Subjects: | |
Online Access: | https://repository.li.mahidol.ac.th/handle/123456789/27738 |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Institution: | Mahidol University |
id |
th-mahidol.27738 |
---|---|
record_format |
dspace |
spelling |
th-mahidol.277382018-09-13T13:44:27Z Dried blood spots for the diagnosis and quantitation of HIV-1: Stability studies and evaluation of sensitivity and specificity for the diagnosis of infant HIV-1 infection in Thailand W. Leelawiwat N. L. Young T. Chaowanachan C. Y. Ou M. Culnane N. Vanprapa N. Waranawat P. Wasinrapee P. A. Mock J. Tappero J. M. McNicholl Thailand Ministry of Public Health National Center for HIV/AIDS, Viral Hepatitis, STD, and TB Prevention Queen Sirikit National Institute of Child Health Mahidol University Immunology and Microbiology Molecular methods for HIV-1 infection using dried blood-spot (DBS) for HIV-1 CRF01_AE subtypes have not been fully optimized. In this study assays for HIV-1 diagnosis or quantitation were evaluated using infant DBS from Thailand. Paired DBS and whole blood samples from 56 HIV-1 CRF01_AE or B'-infected infants were tested for infant diagnosis using modified Amplicor DNA PCR and NucliSens RNA NASBA and an in-house real-time PCR assay. The Amplicor Monitor viral load (VL) assay, with modifications for DBS, was also evaluated. DBS VL were hematocrit corrected. Stability studies were done on DBS stored at -70 °C to 37 °C for up to 1 year. The DBS diagnostic assays were 96-100% sensitive and 100% specific for HIV-1 diagnosis. DBS HIV-1 VL were highly correlated with plasma VL when corrected using the actual or an assumed hematocrit factor (rc= 0.88 or 0.93, respectively). HIV-1 DNA in DBS appeared to be more stable than RNA and could be detected after up to 9 months at most temperatures. DBS VL could be consistently determined when stored frozen. These results show that DBS can be used accurately instead of whole blood for the diagnosis of HIV-1 infection and VL quantitation, particularly if samples are appropriately stored. © 2008 Elsevier B.V. 2018-09-13T06:44:27Z 2018-09-13T06:44:27Z 2009-02-01 Article Journal of Virological Methods. Vol.155, No.2 (2009), 109-117 10.1016/j.jviromet.2008.09.022 01660934 2-s2.0-57849104326 https://repository.li.mahidol.ac.th/handle/123456789/27738 Mahidol University SCOPUS https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=57849104326&origin=inward |
institution |
Mahidol University |
building |
Mahidol University Library |
continent |
Asia |
country |
Thailand Thailand |
content_provider |
Mahidol University Library |
collection |
Mahidol University Institutional Repository |
topic |
Immunology and Microbiology |
spellingShingle |
Immunology and Microbiology W. Leelawiwat N. L. Young T. Chaowanachan C. Y. Ou M. Culnane N. Vanprapa N. Waranawat P. Wasinrapee P. A. Mock J. Tappero J. M. McNicholl Dried blood spots for the diagnosis and quantitation of HIV-1: Stability studies and evaluation of sensitivity and specificity for the diagnosis of infant HIV-1 infection in Thailand |
description |
Molecular methods for HIV-1 infection using dried blood-spot (DBS) for HIV-1 CRF01_AE subtypes have not been fully optimized. In this study assays for HIV-1 diagnosis or quantitation were evaluated using infant DBS from Thailand. Paired DBS and whole blood samples from 56 HIV-1 CRF01_AE or B'-infected infants were tested for infant diagnosis using modified Amplicor DNA PCR and NucliSens RNA NASBA and an in-house real-time PCR assay. The Amplicor Monitor viral load (VL) assay, with modifications for DBS, was also evaluated. DBS VL were hematocrit corrected. Stability studies were done on DBS stored at -70 °C to 37 °C for up to 1 year. The DBS diagnostic assays were 96-100% sensitive and 100% specific for HIV-1 diagnosis. DBS HIV-1 VL were highly correlated with plasma VL when corrected using the actual or an assumed hematocrit factor (rc= 0.88 or 0.93, respectively). HIV-1 DNA in DBS appeared to be more stable than RNA and could be detected after up to 9 months at most temperatures. DBS VL could be consistently determined when stored frozen. These results show that DBS can be used accurately instead of whole blood for the diagnosis of HIV-1 infection and VL quantitation, particularly if samples are appropriately stored. © 2008 Elsevier B.V. |
author2 |
Thailand Ministry of Public Health |
author_facet |
Thailand Ministry of Public Health W. Leelawiwat N. L. Young T. Chaowanachan C. Y. Ou M. Culnane N. Vanprapa N. Waranawat P. Wasinrapee P. A. Mock J. Tappero J. M. McNicholl |
format |
Article |
author |
W. Leelawiwat N. L. Young T. Chaowanachan C. Y. Ou M. Culnane N. Vanprapa N. Waranawat P. Wasinrapee P. A. Mock J. Tappero J. M. McNicholl |
author_sort |
W. Leelawiwat |
title |
Dried blood spots for the diagnosis and quantitation of HIV-1: Stability studies and evaluation of sensitivity and specificity for the diagnosis of infant HIV-1 infection in Thailand |
title_short |
Dried blood spots for the diagnosis and quantitation of HIV-1: Stability studies and evaluation of sensitivity and specificity for the diagnosis of infant HIV-1 infection in Thailand |
title_full |
Dried blood spots for the diagnosis and quantitation of HIV-1: Stability studies and evaluation of sensitivity and specificity for the diagnosis of infant HIV-1 infection in Thailand |
title_fullStr |
Dried blood spots for the diagnosis and quantitation of HIV-1: Stability studies and evaluation of sensitivity and specificity for the diagnosis of infant HIV-1 infection in Thailand |
title_full_unstemmed |
Dried blood spots for the diagnosis and quantitation of HIV-1: Stability studies and evaluation of sensitivity and specificity for the diagnosis of infant HIV-1 infection in Thailand |
title_sort |
dried blood spots for the diagnosis and quantitation of hiv-1: stability studies and evaluation of sensitivity and specificity for the diagnosis of infant hiv-1 infection in thailand |
publishDate |
2018 |
url |
https://repository.li.mahidol.ac.th/handle/123456789/27738 |
_version_ |
1763494034668519424 |