Mass spectrometry-based identification and whole-genome characterisation of the first pteropine orthoreovirus isolated from monkey faeces in Thailand

© 2018 The Author(s). Background: The pteropine orthoreovirus (PRV) was isolated from monkey (Macaca fascicularis) faecal samples collected from human-inhabited areas in Lopburi Province, Thailand. These samples were initially obtained to survey for the presence of hepatitis E virus (HEV). Results:...

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Main Authors: Nathamon Kosoltanapiwat, Onrapak Reamtong, Tamaki Okabayashi, Sumate Ampawong, Amporn Rungruengkitkun, Tipparat Thiangtrongjit, Narin Thippornchai, Pornsawan Leaungwutiwong, Aongart Mahittikorn, Hirotake Mori, Thanada Yoohanngoa, Prechaya Yamwong
Other Authors: Osaka University
Format: Article
Published: 2019
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Online Access:https://repository.li.mahidol.ac.th/handle/123456789/45955
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spelling th-mahidol.459552019-08-23T18:39:59Z Mass spectrometry-based identification and whole-genome characterisation of the first pteropine orthoreovirus isolated from monkey faeces in Thailand Nathamon Kosoltanapiwat Onrapak Reamtong Tamaki Okabayashi Sumate Ampawong Amporn Rungruengkitkun Tipparat Thiangtrongjit Narin Thippornchai Pornsawan Leaungwutiwong Aongart Mahittikorn Hirotake Mori Thanada Yoohanngoa Prechaya Yamwong Osaka University Mahidol University University of Miyazaki Immunology and Microbiology Medicine © 2018 The Author(s). Background: The pteropine orthoreovirus (PRV) was isolated from monkey (Macaca fascicularis) faecal samples collected from human-inhabited areas in Lopburi Province, Thailand. These samples were initially obtained to survey for the presence of hepatitis E virus (HEV). Results: Two virus isolates were retrieved by virus culture of 55 monkey faecal samples. Liquid chromatography-tandem mass spectrometry (LC-MS/MS) was successfully used to identify the viruses as the segmented dsRNA orthoreovirus. Phylogenetic analysis of the Lopburi orthoreovirus whole-genomes revealed relationships with the well-characterised PRVs Pulau (segment L1), Cangyuan (segments L2, M3 and S3), Melaka (segments L3 and M2), Kampar (segments M1 and S2) and Sikamat (segments S1 and S4) of Southeast Asia and China with nucleotide sequence identities of 93.5-98.9%. RT-PCR showed that PRV was detected in 10.9% (6/55) and HEV was detected in 25.5% (14/55) of the monkey faecal samples. Conclusions: PRV was isolated from monkey faeces for the first time in Thailand via viral culture and LC-MS/MS. The genetic diversity of the virus genome segments suggested a re-assortment within the PRV species group. The overall findings emphasise that monkey faeces can be sources of zoonotic viruses, including PRV and HEV, and suggest the need for active virus surveillance in areas of human and monkey co-habitation to prevent and control emerging zoonotic diseases in the future. 2019-08-23T11:17:12Z 2019-08-23T11:17:12Z 2018-10-17 Article BMC Microbiology. Vol.18, No.1 (2018) 10.1186/s12866-018-1302-9 14712180 2-s2.0-85055000131 https://repository.li.mahidol.ac.th/handle/123456789/45955 Mahidol University SCOPUS https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85055000131&origin=inward
institution Mahidol University
building Mahidol University Library
continent Asia
country Thailand
Thailand
content_provider Mahidol University Library
collection Mahidol University Institutional Repository
topic Immunology and Microbiology
Medicine
spellingShingle Immunology and Microbiology
Medicine
Nathamon Kosoltanapiwat
Onrapak Reamtong
Tamaki Okabayashi
Sumate Ampawong
Amporn Rungruengkitkun
Tipparat Thiangtrongjit
Narin Thippornchai
Pornsawan Leaungwutiwong
Aongart Mahittikorn
Hirotake Mori
Thanada Yoohanngoa
Prechaya Yamwong
Mass spectrometry-based identification and whole-genome characterisation of the first pteropine orthoreovirus isolated from monkey faeces in Thailand
description © 2018 The Author(s). Background: The pteropine orthoreovirus (PRV) was isolated from monkey (Macaca fascicularis) faecal samples collected from human-inhabited areas in Lopburi Province, Thailand. These samples were initially obtained to survey for the presence of hepatitis E virus (HEV). Results: Two virus isolates were retrieved by virus culture of 55 monkey faecal samples. Liquid chromatography-tandem mass spectrometry (LC-MS/MS) was successfully used to identify the viruses as the segmented dsRNA orthoreovirus. Phylogenetic analysis of the Lopburi orthoreovirus whole-genomes revealed relationships with the well-characterised PRVs Pulau (segment L1), Cangyuan (segments L2, M3 and S3), Melaka (segments L3 and M2), Kampar (segments M1 and S2) and Sikamat (segments S1 and S4) of Southeast Asia and China with nucleotide sequence identities of 93.5-98.9%. RT-PCR showed that PRV was detected in 10.9% (6/55) and HEV was detected in 25.5% (14/55) of the monkey faecal samples. Conclusions: PRV was isolated from monkey faeces for the first time in Thailand via viral culture and LC-MS/MS. The genetic diversity of the virus genome segments suggested a re-assortment within the PRV species group. The overall findings emphasise that monkey faeces can be sources of zoonotic viruses, including PRV and HEV, and suggest the need for active virus surveillance in areas of human and monkey co-habitation to prevent and control emerging zoonotic diseases in the future.
author2 Osaka University
author_facet Osaka University
Nathamon Kosoltanapiwat
Onrapak Reamtong
Tamaki Okabayashi
Sumate Ampawong
Amporn Rungruengkitkun
Tipparat Thiangtrongjit
Narin Thippornchai
Pornsawan Leaungwutiwong
Aongart Mahittikorn
Hirotake Mori
Thanada Yoohanngoa
Prechaya Yamwong
format Article
author Nathamon Kosoltanapiwat
Onrapak Reamtong
Tamaki Okabayashi
Sumate Ampawong
Amporn Rungruengkitkun
Tipparat Thiangtrongjit
Narin Thippornchai
Pornsawan Leaungwutiwong
Aongart Mahittikorn
Hirotake Mori
Thanada Yoohanngoa
Prechaya Yamwong
author_sort Nathamon Kosoltanapiwat
title Mass spectrometry-based identification and whole-genome characterisation of the first pteropine orthoreovirus isolated from monkey faeces in Thailand
title_short Mass spectrometry-based identification and whole-genome characterisation of the first pteropine orthoreovirus isolated from monkey faeces in Thailand
title_full Mass spectrometry-based identification and whole-genome characterisation of the first pteropine orthoreovirus isolated from monkey faeces in Thailand
title_fullStr Mass spectrometry-based identification and whole-genome characterisation of the first pteropine orthoreovirus isolated from monkey faeces in Thailand
title_full_unstemmed Mass spectrometry-based identification and whole-genome characterisation of the first pteropine orthoreovirus isolated from monkey faeces in Thailand
title_sort mass spectrometry-based identification and whole-genome characterisation of the first pteropine orthoreovirus isolated from monkey faeces in thailand
publishDate 2019
url https://repository.li.mahidol.ac.th/handle/123456789/45955
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