Pyramid graph cut: Integrating intensity and gradient information for grayscale medical image segmentation

© 2020 Elsevier Ltd Segmentation of grayscale medical images is challenging because of the similarity of pixel intensities and poor gradient strength between adjacent regions. The existing image segmentation approaches based on either intensity or gradient information alone often fail to produce acc...

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Main Authors: Thanongchai Siriapisith, Worapan Kusakunniran, Peter Haddawy
Other Authors: Mahidol University
Format: Article
Published: 2020
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Online Access:https://repository.li.mahidol.ac.th/handle/123456789/59040
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spelling th-mahidol.590402020-10-05T12:37:46Z Pyramid graph cut: Integrating intensity and gradient information for grayscale medical image segmentation Thanongchai Siriapisith Worapan Kusakunniran Peter Haddawy Mahidol University Faculty of Medicine, Siriraj Hospital, Mahidol University University of Bremen Computer Science Medicine © 2020 Elsevier Ltd Segmentation of grayscale medical images is challenging because of the similarity of pixel intensities and poor gradient strength between adjacent regions. The existing image segmentation approaches based on either intensity or gradient information alone often fail to produce accurate segmentation results. Previous approaches in the literature have approached the problem by embedded or sequential integration of different information types to improve the performance of the image segmentation on specific tasks. However, an effective combination or integration of such information is difficult to implement and not sufficiently generic for closely related tasks. Integration of the two information sources in a single graph structure is a potentially more effective way to solve the problem. In this paper we introduce a novel technique for grayscale medical image segmentation called pyramid graph cut, which combines intensity and gradient sources of information in a pyramid-shaped graph structure using a single source node and multiple sink nodes. The source node, which is the top of the pyramid graph, embeds intensity information into its linked edges. The sink nodes, which are the base of the pyramid graph, embed gradient information into their linked edges. The min-cut uses intensity information and gradient information, depending on which one is more useful or has a higher influence in each cutting location of each iteration. The experimental results demonstrate the effectiveness of the proposed method over intensity-based segmentation alone (i.e. Gaussian mixture model) and gradient-based segmentation alone (i.e. distance regularized level set evolution) on grayscale medical image datasets, including the public 3DIRCADb-01 dataset. The proposed method archives excellent segmentation results on the sample CT of abdominal aortic aneurysm, MRI of liver tumor and US of liver tumor, with dice scores of 90.49±5.23%, 88.86±11.77%, 90.68±2.45%, respectively. 2020-10-05T04:39:37Z 2020-10-05T04:39:37Z 2020-11-01 Article Computers in Biology and Medicine. Vol.126, (2020) 10.1016/j.compbiomed.2020.103997 18790534 00104825 2-s2.0-85091635669 https://repository.li.mahidol.ac.th/handle/123456789/59040 Mahidol University SCOPUS https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85091635669&origin=inward
institution Mahidol University
building Mahidol University Library
continent Asia
country Thailand
Thailand
content_provider Mahidol University Library
collection Mahidol University Institutional Repository
topic Computer Science
Medicine
spellingShingle Computer Science
Medicine
Thanongchai Siriapisith
Worapan Kusakunniran
Peter Haddawy
Pyramid graph cut: Integrating intensity and gradient information for grayscale medical image segmentation
description © 2020 Elsevier Ltd Segmentation of grayscale medical images is challenging because of the similarity of pixel intensities and poor gradient strength between adjacent regions. The existing image segmentation approaches based on either intensity or gradient information alone often fail to produce accurate segmentation results. Previous approaches in the literature have approached the problem by embedded or sequential integration of different information types to improve the performance of the image segmentation on specific tasks. However, an effective combination or integration of such information is difficult to implement and not sufficiently generic for closely related tasks. Integration of the two information sources in a single graph structure is a potentially more effective way to solve the problem. In this paper we introduce a novel technique for grayscale medical image segmentation called pyramid graph cut, which combines intensity and gradient sources of information in a pyramid-shaped graph structure using a single source node and multiple sink nodes. The source node, which is the top of the pyramid graph, embeds intensity information into its linked edges. The sink nodes, which are the base of the pyramid graph, embed gradient information into their linked edges. The min-cut uses intensity information and gradient information, depending on which one is more useful or has a higher influence in each cutting location of each iteration. The experimental results demonstrate the effectiveness of the proposed method over intensity-based segmentation alone (i.e. Gaussian mixture model) and gradient-based segmentation alone (i.e. distance regularized level set evolution) on grayscale medical image datasets, including the public 3DIRCADb-01 dataset. The proposed method archives excellent segmentation results on the sample CT of abdominal aortic aneurysm, MRI of liver tumor and US of liver tumor, with dice scores of 90.49±5.23%, 88.86±11.77%, 90.68±2.45%, respectively.
author2 Mahidol University
author_facet Mahidol University
Thanongchai Siriapisith
Worapan Kusakunniran
Peter Haddawy
format Article
author Thanongchai Siriapisith
Worapan Kusakunniran
Peter Haddawy
author_sort Thanongchai Siriapisith
title Pyramid graph cut: Integrating intensity and gradient information for grayscale medical image segmentation
title_short Pyramid graph cut: Integrating intensity and gradient information for grayscale medical image segmentation
title_full Pyramid graph cut: Integrating intensity and gradient information for grayscale medical image segmentation
title_fullStr Pyramid graph cut: Integrating intensity and gradient information for grayscale medical image segmentation
title_full_unstemmed Pyramid graph cut: Integrating intensity and gradient information for grayscale medical image segmentation
title_sort pyramid graph cut: integrating intensity and gradient information for grayscale medical image segmentation
publishDate 2020
url https://repository.li.mahidol.ac.th/handle/123456789/59040
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