Geno-spatial distribution of mycobacterium tuberculosis and drug resistance profiles in myanmar⇓thai border area

© 2020 by the authors. Licensee MDPI, Basel, Switzerland. Worldwide, studies investigating the relationship between the lineage of Mycobacterium tuberculosis (MTB) across geographic areas has empowered the “End TB” program and understand transmission across national boundaries. Genomic diversity of...

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Main Authors: Htet Myat Win Maung, Prasit Palittapongarnpim, Htin Lin Aung, Komwit Surachat, Wint Wint Nyunt, Virasakdi Chongsuvivatwong
Other Authors: University of Otago
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Published: 2020
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Online Access:https://repository.li.mahidol.ac.th/handle/123456789/59990
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spelling th-mahidol.599902020-11-18T17:03:46Z Geno-spatial distribution of mycobacterium tuberculosis and drug resistance profiles in myanmar⇓thai border area Htet Myat Win Maung Prasit Palittapongarnpim Htin Lin Aung Komwit Surachat Wint Wint Nyunt Virasakdi Chongsuvivatwong University of Otago Mahidol University Prince of Songkla University Ministry of Health and Sports National TB Programme Immunology and Microbiology Medicine © 2020 by the authors. Licensee MDPI, Basel, Switzerland. Worldwide, studies investigating the relationship between the lineage of Mycobacterium tuberculosis (MTB) across geographic areas has empowered the “End TB” program and understand transmission across national boundaries. Genomic diversity of MTB varies with geographical locations and ethnicity. Genomic diversity can also affect the emergence of drug resistance. In Myanmar, we still have limited genetic information about geographical, ethnicity, and drug resistance linkage to MTB genetic information. This study aimed to describe the geno-spatial distribution of MTB and drug resistance profiles in Myanmar–Thailand border areas. A cross-sectional study was conducted with a total of 109 sequenced isolates. The lineages of MTB and the potential associated socio-demographic, geographic and clinical factors were analyzed using Fisher’s exact tests. p value of statistically significance was set at < 0.05. We found that 67% of the isolates were lineage 1 (L1)/East-African-Indian (EAI) (n = 73), followed by lineage 2 (L2)/Beijing (n = 26), lineage 4 (L4)/European American (n = 6) and lineage 3 (L3)/Delhi/Central Asian (n = 4). “Gender”, “type of TB patient”, “sputum smear grading” and “streptomycin resistance” were significantly different with the lineages of MTB. Sublineages of L1, which had never been reported elsewhere in Myanmar, were detected in this study area. Moreover, both ethnicity and lineage of MTB significantly differed in distribution by patient location. Diversity of the lineage of MTB and detection of new sublineages suggested that this small area had been resided by a heterogeneous population group who actively transmitted the disease. This information on distribution of lineage of MTB can be linked in the future with those on the other side of the border to evaluate cross-border transmission. 2020-11-18T09:28:50Z 2020-11-18T09:28:50Z 2020-09-30 Article Tropical Medicine and Infectious Disease. Vol.5, No.4 (2020) 10.3390/tropicalmed5040153 24146366 2-s2.0-85093522076 https://repository.li.mahidol.ac.th/handle/123456789/59990 Mahidol University SCOPUS https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85093522076&origin=inward
institution Mahidol University
building Mahidol University Library
continent Asia
country Thailand
Thailand
content_provider Mahidol University Library
collection Mahidol University Institutional Repository
topic Immunology and Microbiology
Medicine
spellingShingle Immunology and Microbiology
Medicine
Htet Myat Win Maung
Prasit Palittapongarnpim
Htin Lin Aung
Komwit Surachat
Wint Wint Nyunt
Virasakdi Chongsuvivatwong
Geno-spatial distribution of mycobacterium tuberculosis and drug resistance profiles in myanmar⇓thai border area
description © 2020 by the authors. Licensee MDPI, Basel, Switzerland. Worldwide, studies investigating the relationship between the lineage of Mycobacterium tuberculosis (MTB) across geographic areas has empowered the “End TB” program and understand transmission across national boundaries. Genomic diversity of MTB varies with geographical locations and ethnicity. Genomic diversity can also affect the emergence of drug resistance. In Myanmar, we still have limited genetic information about geographical, ethnicity, and drug resistance linkage to MTB genetic information. This study aimed to describe the geno-spatial distribution of MTB and drug resistance profiles in Myanmar–Thailand border areas. A cross-sectional study was conducted with a total of 109 sequenced isolates. The lineages of MTB and the potential associated socio-demographic, geographic and clinical factors were analyzed using Fisher’s exact tests. p value of statistically significance was set at < 0.05. We found that 67% of the isolates were lineage 1 (L1)/East-African-Indian (EAI) (n = 73), followed by lineage 2 (L2)/Beijing (n = 26), lineage 4 (L4)/European American (n = 6) and lineage 3 (L3)/Delhi/Central Asian (n = 4). “Gender”, “type of TB patient”, “sputum smear grading” and “streptomycin resistance” were significantly different with the lineages of MTB. Sublineages of L1, which had never been reported elsewhere in Myanmar, were detected in this study area. Moreover, both ethnicity and lineage of MTB significantly differed in distribution by patient location. Diversity of the lineage of MTB and detection of new sublineages suggested that this small area had been resided by a heterogeneous population group who actively transmitted the disease. This information on distribution of lineage of MTB can be linked in the future with those on the other side of the border to evaluate cross-border transmission.
author2 University of Otago
author_facet University of Otago
Htet Myat Win Maung
Prasit Palittapongarnpim
Htin Lin Aung
Komwit Surachat
Wint Wint Nyunt
Virasakdi Chongsuvivatwong
format Article
author Htet Myat Win Maung
Prasit Palittapongarnpim
Htin Lin Aung
Komwit Surachat
Wint Wint Nyunt
Virasakdi Chongsuvivatwong
author_sort Htet Myat Win Maung
title Geno-spatial distribution of mycobacterium tuberculosis and drug resistance profiles in myanmar⇓thai border area
title_short Geno-spatial distribution of mycobacterium tuberculosis and drug resistance profiles in myanmar⇓thai border area
title_full Geno-spatial distribution of mycobacterium tuberculosis and drug resistance profiles in myanmar⇓thai border area
title_fullStr Geno-spatial distribution of mycobacterium tuberculosis and drug resistance profiles in myanmar⇓thai border area
title_full_unstemmed Geno-spatial distribution of mycobacterium tuberculosis and drug resistance profiles in myanmar⇓thai border area
title_sort geno-spatial distribution of mycobacterium tuberculosis and drug resistance profiles in myanmar⇓thai border area
publishDate 2020
url https://repository.li.mahidol.ac.th/handle/123456789/59990
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