Effect of gene polymorphisms in ADAM33, TGFβ1, VEGFA, and PLAUR on asthma in Thai population

Background: Most of the asthma susceptibility genes have demonstrated moderate effect. Gene-gene interaction may play a role in asthma. Objectives: To investigate the genetic and gene-gene interaction effects of single nucleotide polymorphisms (SNPs) in the ADAM33, TGFβ1, VEGFA, and PLAUR genes on a...

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Main Authors: Torpong Thongngarm, Aree Jameekornrak, Nachol Chaiyaratana, Wanna Thongnoppakhun, Atik Sangasapaviliya, Orathai Jirapongsananuruk, Chanin Limwongse
Other Authors: Siriraj Hospital
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Published: 2022
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Online Access:https://repository.li.mahidol.ac.th/handle/123456789/74144
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spelling th-mahidol.741442022-08-04T11:27:31Z Effect of gene polymorphisms in ADAM33, TGFβ1, VEGFA, and PLAUR on asthma in Thai population Torpong Thongngarm Aree Jameekornrak Nachol Chaiyaratana Wanna Thongnoppakhun Atik Sangasapaviliya Orathai Jirapongsananuruk Chanin Limwongse Siriraj Hospital King Mongkut's University of Technology North Bangkok Phramongkutklao College of Medicine Immunology and Microbiology Medicine Background: Most of the asthma susceptibility genes have demonstrated moderate effect. Gene-gene interaction may play a role in asthma. Objectives: To investigate the genetic and gene-gene interaction effects of single nucleotide polymorphisms (SNPs) in the ADAM33, TGFβ1, VEGFA, and PLAUR genes on asthma in Thai population. Methods: Two hundred and fifty control and 250 asthmatic Thai subjects were recruited. Asthma was diagnosed based on symptoms and spirometry assessments using criteria outlined by the American Thoracic Society. Degrees of asthma severity were determined according to guidelines provided by the Global Initiative for Asthma. Asthmatic subjects were subcategorized into the low-severity (n = 106) and high-severity (n = 144) groups. Eleven SNPs in four genes were genotyped, including ADAM33 SNPs (rs528557/S2, rs598418, rs44707/ST+4), TGFβ1 SNPs (rs2241715, rs11466345), VEG-FA SNPs (rs833069, rs3025010), and PLAUR SNPs (rs344781, rs344787, rs2239374, rs2239372). Association analyses between SNPs and asthma, and tests for gene-gene interaction were performed. Results: The ADAM33 rs528557/S2 SNP was found to be associated with asthma according to the additive and dominant models. Comparison between the low-severity group and controls showed the VEGFA rs833069 SNP to be significantly associated with the low-severity group. No gene-gene interactions were observed in this study. Conclusions: The ADAM33 rs528557/S2 and the VEGFA rs833069 SNPs were associated with Thai asthmatics, as well as with other populations worldwide. Further studies are warranted to investigate the use these SNPs as biomarkers for establishing early diagnosis or for predicting future risk of asthma. 2022-08-04T04:08:53Z 2022-08-04T04:08:53Z 2022-03-01 Article Asian Pacific Journal of Allergy and Immunology. Vol.40, No.1 (2022), 39-46 10.12932/AP-010419-0532 22288694 0125877X 2-s2.0-85128001176 https://repository.li.mahidol.ac.th/handle/123456789/74144 Mahidol University SCOPUS https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85128001176&origin=inward
institution Mahidol University
building Mahidol University Library
continent Asia
country Thailand
Thailand
content_provider Mahidol University Library
collection Mahidol University Institutional Repository
topic Immunology and Microbiology
Medicine
spellingShingle Immunology and Microbiology
Medicine
Torpong Thongngarm
Aree Jameekornrak
Nachol Chaiyaratana
Wanna Thongnoppakhun
Atik Sangasapaviliya
Orathai Jirapongsananuruk
Chanin Limwongse
Effect of gene polymorphisms in ADAM33, TGFβ1, VEGFA, and PLAUR on asthma in Thai population
description Background: Most of the asthma susceptibility genes have demonstrated moderate effect. Gene-gene interaction may play a role in asthma. Objectives: To investigate the genetic and gene-gene interaction effects of single nucleotide polymorphisms (SNPs) in the ADAM33, TGFβ1, VEGFA, and PLAUR genes on asthma in Thai population. Methods: Two hundred and fifty control and 250 asthmatic Thai subjects were recruited. Asthma was diagnosed based on symptoms and spirometry assessments using criteria outlined by the American Thoracic Society. Degrees of asthma severity were determined according to guidelines provided by the Global Initiative for Asthma. Asthmatic subjects were subcategorized into the low-severity (n = 106) and high-severity (n = 144) groups. Eleven SNPs in four genes were genotyped, including ADAM33 SNPs (rs528557/S2, rs598418, rs44707/ST+4), TGFβ1 SNPs (rs2241715, rs11466345), VEG-FA SNPs (rs833069, rs3025010), and PLAUR SNPs (rs344781, rs344787, rs2239374, rs2239372). Association analyses between SNPs and asthma, and tests for gene-gene interaction were performed. Results: The ADAM33 rs528557/S2 SNP was found to be associated with asthma according to the additive and dominant models. Comparison between the low-severity group and controls showed the VEGFA rs833069 SNP to be significantly associated with the low-severity group. No gene-gene interactions were observed in this study. Conclusions: The ADAM33 rs528557/S2 and the VEGFA rs833069 SNPs were associated with Thai asthmatics, as well as with other populations worldwide. Further studies are warranted to investigate the use these SNPs as biomarkers for establishing early diagnosis or for predicting future risk of asthma.
author2 Siriraj Hospital
author_facet Siriraj Hospital
Torpong Thongngarm
Aree Jameekornrak
Nachol Chaiyaratana
Wanna Thongnoppakhun
Atik Sangasapaviliya
Orathai Jirapongsananuruk
Chanin Limwongse
format Article
author Torpong Thongngarm
Aree Jameekornrak
Nachol Chaiyaratana
Wanna Thongnoppakhun
Atik Sangasapaviliya
Orathai Jirapongsananuruk
Chanin Limwongse
author_sort Torpong Thongngarm
title Effect of gene polymorphisms in ADAM33, TGFβ1, VEGFA, and PLAUR on asthma in Thai population
title_short Effect of gene polymorphisms in ADAM33, TGFβ1, VEGFA, and PLAUR on asthma in Thai population
title_full Effect of gene polymorphisms in ADAM33, TGFβ1, VEGFA, and PLAUR on asthma in Thai population
title_fullStr Effect of gene polymorphisms in ADAM33, TGFβ1, VEGFA, and PLAUR on asthma in Thai population
title_full_unstemmed Effect of gene polymorphisms in ADAM33, TGFβ1, VEGFA, and PLAUR on asthma in Thai population
title_sort effect of gene polymorphisms in adam33, tgfβ1, vegfa, and plaur on asthma in thai population
publishDate 2022
url https://repository.li.mahidol.ac.th/handle/123456789/74144
_version_ 1763490181937102848