Iterative piecewise linear regression to accurately assess statistical significance in batch confounded differential expression analysis

by Li, J., Choi, K.P., Karuturi, R.K.M.
Published 2014

ConReg-R: Extrapolative recalibration of the empirical distribution of p-values to improve false discovery rate estimates

by Li, J., Paramita, P., Choi, K.P., Karuturi, R.K.M.
Published 2014

Genome-wide estimation of firing efficiencies of origins of DNA replication from time-course copy number variation data

by Luo, H., Li, J., Karuturi, R.K.M., Eshaghi, M., Liu, J.
Published 2011

Adaptive expression responses in the Pol-γ null strain of S. pombe depleted of mitochondrial genome

by Chu, Z., Eshaghi, M., Liu, J., Li, J., Karuturi, R.K.M., Lin, K.
Published 2011

Global profiling of DNA replication timing and efficiency reveals that efficient replication/firing occurs late during S-phase in S. pombe

by Eshaghi, M., Chu, Z., Liu, J., Karuturi, R.K.M., Li, J., Liu, E.T.
Published 2011

Modulation of cell cycle-specific gene expressions at the onset of S phase arrest contributes to the robust DNA replication checkpoint response in fission yeast

by Chu, Z., Eshaghi, M., Peng, X., Liu, J., Li, J., Karuturi, R.K.M.
Published 2011

Transcriptomic Analyses of Sexual Dimorphism of the Zebrafish Liver and the Effect of Sex Hormones

by Zheng, W., Xu, H., Lam, S.H., Luo, H., Karuturi, R.K.M., Gong, Z.
Published 2014

FOXQ1 regulates epithelial-mesenchymal transition in human cancers

by Qiao, Y., Jiang, X., Lee, S.T., Karuturi, R.K.M., Hooi, S.C., Yu, Q.
Published 2014

Deconvolution of chromatin immunoprecipitation-microarray (chIP-chip) analysis of MBF occupancies reveals the temporal recruitment of rep2 at the MBF target genes

by Eshaghi, M., Zhu, L., Chu, Z., Li, J., Chan, C.S., Shahab, A., Karuturi, R.K.M., Liu, J.
Published 2014

Context-Specific Regulation of NF-κB Target Gene Expression by EZH2 in Breast Cancers

by Lee, S.T., Li, Z., Wu, Z., Aau, M., Guan, P., Karuturi, R.K.M., Liou, Y.C., Yu, Q.
Published 2014

Zebrafish whole-adult-organism chemogenomics for large-scale predictive and discovery chemical biology.

by Lam, S.H., Mathavan, S., Tong, Y., Li, H., Karuturi, R.K., Wu, Y., Vega, V.B., Liu, E.T., Gong, Z.
Published 2014

Ablation of phosphoinositide-3-kinase class II alpha suppresses hepatoma cell proliferation

by Ng, S.K.L., Neo, S.-Y., Yap, Y.-W., Karuturi, R.K.M., Loh, E.S.L., Liau, K.-H., Ren, E.-C.
Published 2015

CDKN1C (p57KIP2) is a direct target of EZH2 and suppressed by multiple epigenetic mechanisms in breast cancer cells

by Yang, X., Sun, F., Aau, M., Miller, L.D., Yu, Q., Shao, R., Karuturi, R.K.M., Yu, K., Tan, P.B.O.
Published 2011

Genomic binding profiling of the fission yeast stress-activated MAPK sty1 and the bZIP transcriptional activator Atf1 in response to H2O2

by Eshaghi, M., Lee, J.H., Zhu, L., Poon, S.Y., Li, J., Cho, K.-H., Chu, Z., Karuturi, R.K.M., Liu, J.
Published 2014

Pharmacologic disruption of polycomb-repressive complex 2-mediated gene repression selectively induces apoptosis in cancer cells

by Tan, J., Yang, X., Zhuang, L., Jiang, X., Chen, W., Puay, L.L., Karuturi, R.K.M., Tan, P.B.O., Liu, E.T., Yu, Q.
Published 2014

PDK1 signaling toward PLK1-MYC activation confers oncogenic transformation, tumor-initiating cell activation, and resistance to mTOR-targeted therapy

by Tan, J., Li, Z., Lee, P.L., Guan, P., Aau, M.Y., Lee, S.T., Feng, M., Lim, C.Z., Lee, E.Y.J., Wee, Z.N., Lim, Y.C., Karuturi, R.K.M., Yu, Q.
Published 2014

REST regulates distinct transcriptional networks in embryonic and neural stem cells

by Johnson R., Teh C.H.-L., Kunarso G., Kee Y.W., Srinivasan G., Cooper M.L., Volta M., Chan S.S.-L., Lipovich L., Pollard S.M., Karuturi R.K.M., Wei C.-L., Buckley N.J., Stanton L.W.
Published 2020

The core and accessory genomes of Burkholderia pseudomallei: Implications for human melioidosis

by Siew, H.S., Yu, Y., Chi, H.L., Karuturi, R.K.M., Wuthiekanun, V., Tuanyok, A., Hui, H.C., Ong, C., Paramalingam, S.S., Tan, G., Tang, L., Lau, G., Eng, E.O., Woods, D., Feil, E., Peacock, S.J., Tan, P.
Published 2014

An oestrogen-receptor-α-bound human chromatin interactome

by Fullwood, M.J., Liu, M.H., Pan, Y.F., Liu, J., Xu, H., Mohamed, Y.B., Orlov, Y.L., Velkov, S., Ho, A., Mei, P.H., Chew, E.G.Y., Huang, P.Y.H., Han, Y., Ooi, H.S., Ariyaratne, P.N., Vega, V.B., Luo, Y., Tan, P.Y., Choy, P.Y., Wansa, K.D.S.A., Zhao, B., Lim, K.S., Leow, S.C., Yow, J.S., Joseph, R., Li, H., Desai, K.V., Thomsen, J.S., Lee, Y.K., Karuturi, R.K.M., Herve, T., Bourque, G., Ruan, X., Cacheux-Rataboul, V., Sung, W.-K., Liu, E.T., Wei, C.-L., Cheung, E., Ruan, Y., Welboren, W.-J., Stunnenberg, H.G.
Published 2011

An oestrogen-receptor-α-bound human chromatin interactome

by Fullwood, M.J., Liu, M.H., Pan, Y.F., Liu, J., Xu, H., Mohamed, Y.B., Orlov, Y.L., Velkov, S., Ho, A., Mei, P.H., Chew, E.G.Y., Huang, P.Y.H., Welboren, W.-J., Han, Y., Ooi, H.S., Ariyaratne, P.N., Vega, V.B., Luo, Y., Tan, P.Y., Choy, P.Y., Wansa, K.D.S.A., Zhao, B., Lim, K.S., Leow, S.C., Yow, J.S., Joseph, R., Li, H., Desai, K.V., Thomsen, J.S., Lee, Y.K., Karuturi, R.K.M., Herve, T., Bourque, G., Stunnenberg, H.G., Ruan, X., Cacheux-Rataboul, V., Sung, W.-K., Liu, E.T., Wei, C.-L., Cheung, E., Ruan, Y.
Published 2014