Improving the performance of the peer to peer network by introducing an assortment of methods

by Sadish Sendil, M, Nagarajan, N
Published 2020

Opera: Reconstructing optimal genomic scaffolds with high-throughput paired-end sequences

by Gao, S., Nagarajan, N., Sung, W.-K.
Published 2013

Opera: Reconstructing optimal genomic scaffolds with high-throughput paired-end sequences

by Gao, S., Sung, W.-K., Nagarajan, N.
Published 2013

Boosting natural history research via metagenomic clean-up of crowdsourced feces

by Srivathsan, A., Nagarajan, N., Meier, R.
Published 2021

2009 swine-origin influenza A (H1N1) resembles previous influenza isolates

by Kingsford C., Nagarajan N., Salzberg S.L.
Published 2019

Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples

by White J.R., Nagarajan N., Pop M.
Published 2019

OPERA-LG: Efficient and exact scaffolding of large, repeat-rich eukaryotic genomes with performance guarantees

by Gao, S, Bertrand, D, Chia, B.K.H, Nagarajan, N
Published 2020

The importance of study design for detecting differentially abundant features in high-throughput experiments

by Luo, H., Li, J., Chia, B.K., Robson, P., Nagarajan, N.
Published 2020

Fast and sensitive mapping of nanopore sequencing reads with GraphMap

by Sovi?, I, Šiki?, M, Wilm, A, Fenlon, S.N, Chen, S, Nagarajan, N
Published 2020

Alignment and clustering of phylogenetic markers - implications for microbial diversity studies

by White, J.R, Navlakha, S, Nagarajan, N, Ghodsi, M, Kingsford, C, Pop, M
Published 2020

Draft genome sequence of polychlorinated biphenyl-dechlorinating Dehalococcoides mccartyi strain SG1, which carries a circular putative plasmid

by Wang S., Chng K.R., Wu C., Wilm A., Nagarajan N., He J.
Published 2020

Development and application of a transcriptional sensor for detection of heterologous acrylic acid production in E. coli

by Raghavan, S.S., Chee, S., Li, J., Poschmann, J., Nagarajan, N., Jia Wei, S., Verma, C.S., Ghadessy, F.J.
Published 2022

An expectation-maximization algorithm enables accurate ecological modeling using longitudinal microbiome sequencing data

by Li, C., Chng, K.R., Kwah, J.S., Av-Shalom, T.V., Tucker-Kellogg, L., Nagarajan, N.
Published 2021

Development of a genetically programed vanillin-sensing bacterium for high-throughput screening of lignin-degrading enzyme libraries

by Sana, B, Chia, K.H.B, Raghavan, S.S, Ramalingam, B, Nagarajan, N, Seayad, J, Ghadessy, F.J
Published 2020

Species Identification and Profiling of Complex Microbial Communities Using Shotgun Illumina Sequencing of 16S rRNA Amplicon Sequences

by Ong S.H., Kukkillaya V.U., Wilm A., Lay C., Ho E.X.P., Low L., Hibberd M.L., Nagarajan N.
Published 2019

Tracking Dengue Virus Intra-host Genetic Diversity during Human-to-Mosquito Transmission

by Sim S., Aw P.P.K., Wilm A., Teoh G., Hue K.D.T., Nguyen N.M., Nagarajan N., Simmons C.P., Hibberd M.L.
Published 2019

Finishing genomes with limited resources: Lessons from an ensemble of microbial genomes

by Nagarajan, N, Cook, C, Di Bonaventura, M, Ge, H, Richards, A, Bishop-Lilly, K.A, DeSalle, R, Read, T.D, Pop, M
Published 2020

Measurement of fetal fraction in cell-free DNA from maternal plasma using a panel of insertion/deletion polymorphisms

by Barrett A.N., Xiong L., Tan T.Z., Advani H.V., Hua R., Laureano-Asibal C., Soong R., Biswas A., Nagarajan N., Choolani M.
Published 2020

Genome sequencing of four strains of Rickettsia prowazekii, the causative agent of epidemic typhus, including one flying squirrel isolate

by Bishop-Lilly, K.A, Ge, H, Butani, A, Osborne, B, Verratti, K, Mokashi, V, Nagarajan, N, Pop, M, Read, T.D, Richards, A.L
Published 2020

Long-term ecological and evolutionary dynamics in the gut microbiomes of carbapenemase-producing Enterobacteriaceae colonized subjects

by Kang, JTL, Teo, JJY, Bertrand, D, Ng, A, Ravikrishnan, A, Yong, M, Ng, OT, Marimuthu, K, Chen, SL, Chng, KR, Gan, YH, Nagarajan, N
Published 2022