Fast and sensitive mapping of nanopore sequencing reads with GraphMap

by Sovi?, I, Šiki?, M, Wilm, A, Fenlon, S.N, Chen, S, Nagarajan, N
Published 2020

Draft genome sequence of polychlorinated biphenyl-dechlorinating Dehalococcoides mccartyi strain SG1, which carries a circular putative plasmid

by Wang S., Chng K.R., Wu C., Wilm A., Nagarajan N., He J.
Published 2020

Species Identification and Profiling of Complex Microbial Communities Using Shotgun Illumina Sequencing of 16S rRNA Amplicon Sequences

by Ong S.H., Kukkillaya V.U., Wilm A., Lay C., Ho E.X.P., Low L., Hibberd M.L., Nagarajan N.
Published 2019

Tracking Dengue Virus Intra-host Genetic Diversity during Human-to-Mosquito Transmission

by Sim S., Aw P.P.K., Wilm A., Teoh G., Hue K.D.T., Nguyen N.M., Nagarajan N., Simmons C.P., Hibberd M.L.
Published 2019

Analysis of Dengue Virus Genetic Diversity during Human and Mosquito Infection Reveals Genetic Constraints

by Sessions O.M., Wilm A., Kamaraj U.S., Choy M.M., Chow A., Chong Y., Ong X.M., Nagarajan N., Cook A.R., Ooi E.E.
Published 2018

BAsE-Seq: a method for obtaining long viral haplotypes from short sequence reads

by Hong, L.Z., Hong, S., Wong, H.T., Aw, P.P., Cheng, Y., Wilm, A., de Sessions, P.F., Lim, S.G., Nagarajan, N., Hibberd, M.L., Quake, S.R., Burkholder, W.F.
Published 2020

Single-virion sequencing of lamivudine-treated HBV populations reveal population evolution dynamics and demographic history

by Zhu, Y.O, Aw, P.P.K, de Sessions, P.F, Hong, S, See, L.X, Hong, L.Z, Wilm, A, Li, C.H, Hue, S, Lim, S.G, Nagarajan, N, Burkholder, W.F, Hibberd, M
Published 2020

Human pharyngeal microbiota in age-related macular degeneration

by Ho E.X.P., Cheung C.M.G., Sim S., Chu C.W., Wilm A., Lin C.B., Mathur R., Wong D., Chan C.M., Bhagarva M., Laude A., Lim T.H., Wong T.Y., Cheng C.Y., Davila S., Hibberd M.
Published 2020

Structure mapping of dengue and Zika viruses reveals functional long-range interactions

by Huber, R.G., Lim, X.N., Ng, W.C., Sim, A.Y.L., Poh, H.X., Shen, Y., Lim, S.Y., Sundstrom, K.B., Sun, X., Aw, J.G., Too, H.K., Boey, P.H., Wilm, A., Chawla, T., Choy, M.M., Jiang, L., de Sessions, P.F., Loh, X.J., Alonso, S., Hibberd, M., Nagarajan, N., Ooi, E.E., Bond, P.J., Sessions, O.M., Wan, Y.
Published 2021

Direct whole-genome deep-sequencing of human respiratory syncytial virus A and B from Vietnamese children identifies distinct patterns of inter- and intra-host evolution

by Ha Do, L.A, Wilm, A, Van Doorn, H.R, Lam, H.M, Sim, S, Sukumaran, R, Tran, A.T, Nguyen, B.H, Tran, T.T.L, Tran, Q.H, Vo, Q.B, Tran Dac, N.A, Trinh, H.N, Nguyen, T.T.H, Le Binh, B.T, Le, K, Nguyen, M.T, Thai, Q.T, Vo, T.V, Minh Ngo, N.Q, Dang, T.K.H, Cao, N.H, Van Tran, T, Ho, L.V, Farrar, J, De Jong, M, Chen, S, Nagarajan, N, Bryant, J.E, Hibberd, M.L
Published 2020

Large-Scale Whole-Genome Sequencing of Three Diverse Asian Populations in Singapore

by Wu, D., Dou, J., Chai, X., Bellis, C., Wilm, A., Shih, C.C., Soon, W.W.J., Bertin, N., Lin, C.B., Khor, C.C., DeGiorgio, M., Cheng, S., Bao, L., Karnani, N., Hwang, W.Y.K., Davila, S., Tan, P., Shabbir, A., Moh, A., Tan, E.-K., Foo, R.S.Y., Goh, L.L., Leong, K.P., Foo, R.S.Y., Lam, C.S.P., Richards, A.M., Cheng, C.-Y., Aung, T., Wong, T.Y., Ng, H.H., SG10K Consortium, Liu, J., Wang, C.
Published 2022