A comprehensive RNA handling and transcriptomics guide for high-throughput processing of Plasmodium blood-stage samples

by Kucharski, Michal, Tripathi, Jaishree, Nayak, Sourav, Zhu, Lei, Wirjanata, Grennady, van der Pluijm, Rob W., Dhorda, Mehul, Dondorp, Arjen, Bozdech, Zbynek
Published 2021

The artemisinin-induced dormant stages of Plasmodium falciparum exhibit hallmarks of cellular quiescence/senescence and drug resilience

by Tripathi, Jaishree, Stoklasa, Michal, Nayak, Sourav, Low, Kay En, Lee, Erica Qian Hui, Tien, Quang Huy Duong, Rénia, Laurent, Malleret, Benoit, Bozdech, Zbynek
Published 2024

Short tandem repeat polymorphism in the promoter region of cyclophilin 19B drives its transcriptional upregulation and contributes to drug resistance in the malaria parasite Plasmo...

by Kucharski, Michal, Wirjanata, Grennady, Nayak, Sourav, Boentoro, Josephine, Dziekan, Jerzy Michal, Assisi, Christina, van der Pluijm, Rob W., Miotto, Olivo, Mok, Sachel, Dondorp, Arjen M., Bozdech, Zbynek
Published 2023

Artemisinin resistance in the malaria parasite, Plasmodium falciparum, originates from its initial transcriptional response

by Zhu, Lei, van der Pluijm, Rob W., Kucharski, Michal, Nayak, Sourav, Tripathi, Jaishree, White, Nicholas J., Day, Nicholas P. J., Faiz, Abul, Phyo, Aung Pyae, Amaratunga, Chanaki, Lek, Dysoley, Ashley, Elizabeth A., Nosten, François, Smithuis, Frank, Ginsburg, Hagai, von Seidlein, Lorenz, Lin, Khin, Imwong, Mallika, Chotivanich, Kesinee, Mayxay, Mayfong, Dhorda, Mehul, Nguyen, Hoang Chau, Nguyen, Thuy Nhien Thanh, Miotto, Olivo, Newton, Paul N., Jittamala, Podjanee, Tripura, Rupam, Pukrittayakamee, Sasithon, Peto, Thomas J., Hien, Tran Tinh, Dondorp, Arjen M., Bozdech, Zbynek
Published 2022