ENGINEERING BACILLUS SUBTILIS FOR PRODUCTION ANTIMALARIA ARTEMISININ AND ANTICANCER PACLITAXEL PRECURSORS
The creation of microbial cell factories for sustainable production of natural products is important for medical and industrial applications. With its generally recognized as safe status and its high capacity of endogenous pathway, Bacillus subtilis holds important position as a candidate for ter...
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id-itb.:486282020-06-30T08:45:19ZENGINEERING BACILLUS SUBTILIS FOR PRODUCTION ANTIMALARIA ARTEMISININ AND ANTICANCER PACLITAXEL PRECURSORS Pramastya, Hegar Indonesia Dissertations Bacillus subtilis, terpenoid cell factory, taxadiene, amorphadiene, carotenoid, methyl erythritol phosphate (MEP) pathway, mevalonate (MVA) pathway INSTITUT TEKNOLOGI BANDUNG https://digilib.itb.ac.id/gdl/view/48628 The creation of microbial cell factories for sustainable production of natural products is important for medical and industrial applications. With its generally recognized as safe status and its high capacity of endogenous pathway, Bacillus subtilis holds important position as a candidate for terpenoid cell factory. However, higher scale production of natural product requires stable expression of a biosynthetic pathway enzymes. The aim of this study was to construct B. subtilis strains capable of producing high titer of amorphadiene and taxadiene by upregulating endogenous methyl erythritol phosphate (MEP) pathway or installing the heterologous mevalonate (MVA) pathway. First, the stable expression of extra endogenous pathway was established by construction of a regulated synthetic operon consisting eight genes of MEP pathway together with ispA gene encoding farnesyl diphosphate synthase. The operon constructed in theta replicating plasmid was segregationally and structurally more stable compared to rolling circle plasmid which eventually brought high production of C30 carotenoid in B. subtilis carrying crtM and crtN genes up to 20 mg/gr dried cell weight. The stable synthetic operon was then utilized for production taxadiene as a dedicated precursor of paclitaxel. The diterpene taxadiene requires geranylgeranyl diphosphate which supplied by the geranylgeranyl diphosphate synthase (encoded by crtE) of Pantoea ananatis. In addition to generating appreaciable amount of taxadiene (up to 17.8 mg/L), the research also showed the stable co-expression between two theta replicating plasmids that beneficial for further research in metabolic engineering of B. subtilis. Production of high amount of amorphadiene is required to ensure economically feasible and sustainable production of artemisinin. Amorphadiene synthase (Ads) was poorly expressed in B. subtilis. N-terminal modification of Ads by fusion with optimized green fluorescent protein (Gfp) facilitated higher expression of the protein. The combination of MEP pathway overexpression, Ads improved expression and medium optimization brought amorphadiene production up to 416 ± 15 mg/L in flask scale. Precursor supplementation and pH buffering through pyruvate and potassium phosphate supplementation respectively highlighted the significant of main carbon flux and medium pH control. For the next level, mevalonate (MVA) pathway was constructed to improve the amorphadiene production. The construction combined the upper part of Enterococcus faecalis and lower part of Streptococcus pneumoniae mevalonate pathway. Expression of the upper part of the pathway enabled the bacterium to produce mevalonate. However the whole pathway was not self-sufficient that still required mevalonate supplementation for high production of amorphadiene. MVA pathway heterologous pathway expression together with mevalonate supplementation and upregulation of isopentenyl diphosphate isomerase (Idi) and farnesyl diphosphate synthase (IspA) up to 800 mg/L. Thus, it implied the functionality of lower part of MVA pathway. Meanwhile upper MVA pathway still has to be improved. Taken together, it has been a milestone that B. subtilis can be configured as prospective terpenoid cell factory and might become alternative solution in production of natural product in sustainable manner. text |
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The creation of microbial cell factories for sustainable production of natural
products is important for medical and industrial applications. With its generally
recognized as safe status and its high capacity of endogenous pathway, Bacillus
subtilis holds important position as a candidate for terpenoid cell factory. However,
higher scale production of natural product requires stable expression of a
biosynthetic pathway enzymes. The aim of this study was to construct B. subtilis
strains capable of producing high titer of amorphadiene and taxadiene by
upregulating endogenous methyl erythritol phosphate (MEP) pathway or installing
the heterologous mevalonate (MVA) pathway. First, the stable expression of extra
endogenous pathway was established by construction of a regulated synthetic
operon consisting eight genes of MEP pathway together with ispA gene encoding
farnesyl diphosphate synthase. The operon constructed in theta replicating plasmid
was segregationally and structurally more stable compared to rolling circle plasmid
which eventually brought high production of C30 carotenoid in B. subtilis carrying
crtM and crtN genes up to 20 mg/gr dried cell weight.
The stable synthetic operon was then utilized for production taxadiene as a
dedicated precursor of paclitaxel. The diterpene taxadiene requires geranylgeranyl
diphosphate which supplied by the geranylgeranyl diphosphate synthase (encoded
by crtE) of Pantoea ananatis. In addition to generating appreaciable amount of
taxadiene (up to 17.8 mg/L), the research also showed the stable co-expression
between two theta replicating plasmids that beneficial for further research in
metabolic engineering of B. subtilis.
Production of high amount of amorphadiene is required to ensure economically
feasible and sustainable production of artemisinin. Amorphadiene synthase (Ads)
was poorly expressed in B. subtilis. N-terminal modification of Ads by fusion with
optimized green fluorescent protein (Gfp) facilitated higher expression of the
protein. The combination of MEP pathway overexpression, Ads improved
expression and medium optimization brought amorphadiene production up to 416
± 15 mg/L in flask scale. Precursor supplementation and pH buffering through
pyruvate and potassium phosphate supplementation respectively highlighted the
significant of main carbon flux and medium pH control.
For the next level, mevalonate (MVA) pathway was constructed to improve the
amorphadiene production. The construction combined the upper part of
Enterococcus faecalis and lower part of Streptococcus pneumoniae mevalonate
pathway. Expression of the upper part of the pathway enabled the bacterium to
produce mevalonate. However the whole pathway was not self-sufficient that still
required mevalonate supplementation for high production of amorphadiene. MVA
pathway heterologous pathway expression together with mevalonate
supplementation and upregulation of isopentenyl diphosphate isomerase (Idi) and
farnesyl diphosphate synthase (IspA) up to 800 mg/L. Thus, it implied the
functionality of lower part of MVA pathway. Meanwhile upper MVA pathway still
has to be improved. Taken together, it has been a milestone that B. subtilis can be
configured as prospective terpenoid cell factory and might become alternative
solution in production of natural product in sustainable manner.
|
format |
Dissertations |
author |
Pramastya, Hegar |
spellingShingle |
Pramastya, Hegar ENGINEERING BACILLUS SUBTILIS FOR PRODUCTION ANTIMALARIA ARTEMISININ AND ANTICANCER PACLITAXEL PRECURSORS |
author_facet |
Pramastya, Hegar |
author_sort |
Pramastya, Hegar |
title |
ENGINEERING BACILLUS SUBTILIS FOR PRODUCTION ANTIMALARIA ARTEMISININ AND ANTICANCER PACLITAXEL PRECURSORS |
title_short |
ENGINEERING BACILLUS SUBTILIS FOR PRODUCTION ANTIMALARIA ARTEMISININ AND ANTICANCER PACLITAXEL PRECURSORS |
title_full |
ENGINEERING BACILLUS SUBTILIS FOR PRODUCTION ANTIMALARIA ARTEMISININ AND ANTICANCER PACLITAXEL PRECURSORS |
title_fullStr |
ENGINEERING BACILLUS SUBTILIS FOR PRODUCTION ANTIMALARIA ARTEMISININ AND ANTICANCER PACLITAXEL PRECURSORS |
title_full_unstemmed |
ENGINEERING BACILLUS SUBTILIS FOR PRODUCTION ANTIMALARIA ARTEMISININ AND ANTICANCER PACLITAXEL PRECURSORS |
title_sort |
engineering bacillus subtilis for production antimalaria artemisinin and anticancer paclitaxel precursors |
url |
https://digilib.itb.ac.id/gdl/view/48628 |
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