Inhibitors of leishmania mexicana phosphoglycerate mutase identified by virtual screening and verified by inhibition studies

Cofactor-independent phosphoglycerate mutase has been proposed as a therapeutic target for the treatment of trypanosomatid diseases. In this paper, we report the identification of compounds that could potentially be developed as selective inhibitors of cofactor-independent phosphoglycerate mutase fr...

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Main Authors: Ahmad Fuad, Fazia Adyani, Houston, Douglas Robert, Michels, Paul A M, Fothergill- Gilmore, Linda A., Walkinshaw, Malcolm Douglas
Format: Article
Language:English
English
English
Published: Penerbit Universiti Kebangsaan Malaysia 2016
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Online Access:http://irep.iium.edu.my/53866/1/53866_Inhibitors%20of%20Leishmania.pdf
http://irep.iium.edu.my/53866/2/53866_Inhibitors%20of%20Leishmania_WOS.pdf
http://irep.iium.edu.my/53866/4/53866_Inhibitors%20of%20Leishmania_SCOPUS.pdf
http://irep.iium.edu.my/53866/
http://journalarticle.ukm.my/9986/1/14%20Fazia%20Adyani.pdf
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spelling my.iium.irep.538662017-07-18T06:07:20Z http://irep.iium.edu.my/53866/ Inhibitors of leishmania mexicana phosphoglycerate mutase identified by virtual screening and verified by inhibition studies Ahmad Fuad, Fazia Adyani Houston, Douglas Robert Michels, Paul A M Fothergill- Gilmore, Linda A. Walkinshaw, Malcolm Douglas TA Engineering (General). Civil engineering (General) TA164 Bioengineering Cofactor-independent phosphoglycerate mutase has been proposed as a therapeutic target for the treatment of trypanosomatid diseases. In this paper, we report the identification of compounds that could potentially be developed as selective inhibitors of cofactor-independent phosphoglycerate mutase from Leishmania mexicana (LmiPGAM). Virtual screening was used in this search, as well as compounds identified by high-throughput screening. A ligand-based virtual screen programme, ultra fast shape recognition with atom types (UFSRAT), was used to screen for compounds resembling the substrate/product, before a structure-based approach was applied using AutoDock 4 and AutoDock Vina in a consensus docking scheme. In this way eight selected compounds were identified. In addition, three compounds from the Library of Pharmacologically Active Compounds (LOPAC) were selected from the published results of high-throughput screening of this library. The inhibitory effects of these compounds were tested at a fixed concentration of 1 mM. The results showed that seven compounds inhibited LmiPGAM activity and of these, two compounds (one each from high-throughput and virtual screening) showed substantial inhibition (i.e. 14% and 49% remaining activity, respectively). Taken together, the findings from this study indicate that these compounds have potential as novel inhibitors that specifically target LmiPGAM. Penerbit Universiti Kebangsaan Malaysia 2016-07 Article REM application/pdf en http://irep.iium.edu.my/53866/1/53866_Inhibitors%20of%20Leishmania.pdf application/pdf en http://irep.iium.edu.my/53866/2/53866_Inhibitors%20of%20Leishmania_WOS.pdf application/pdf en http://irep.iium.edu.my/53866/4/53866_Inhibitors%20of%20Leishmania_SCOPUS.pdf Ahmad Fuad, Fazia Adyani and Houston, Douglas Robert and Michels, Paul A M and Fothergill- Gilmore, Linda A. and Walkinshaw, Malcolm Douglas (2016) Inhibitors of leishmania mexicana phosphoglycerate mutase identified by virtual screening and verified by inhibition studies. Sains Malaysiana, 45 (7). pp. 1113-1120. ISSN 0126-6039 http://journalarticle.ukm.my/9986/1/14%20Fazia%20Adyani.pdf
institution Universiti Islam Antarabangsa Malaysia
building IIUM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider International Islamic University Malaysia
content_source IIUM Repository (IREP)
url_provider http://irep.iium.edu.my/
language English
English
English
topic TA Engineering (General). Civil engineering (General)
TA164 Bioengineering
spellingShingle TA Engineering (General). Civil engineering (General)
TA164 Bioengineering
Ahmad Fuad, Fazia Adyani
Houston, Douglas Robert
Michels, Paul A M
Fothergill- Gilmore, Linda A.
Walkinshaw, Malcolm Douglas
Inhibitors of leishmania mexicana phosphoglycerate mutase identified by virtual screening and verified by inhibition studies
description Cofactor-independent phosphoglycerate mutase has been proposed as a therapeutic target for the treatment of trypanosomatid diseases. In this paper, we report the identification of compounds that could potentially be developed as selective inhibitors of cofactor-independent phosphoglycerate mutase from Leishmania mexicana (LmiPGAM). Virtual screening was used in this search, as well as compounds identified by high-throughput screening. A ligand-based virtual screen programme, ultra fast shape recognition with atom types (UFSRAT), was used to screen for compounds resembling the substrate/product, before a structure-based approach was applied using AutoDock 4 and AutoDock Vina in a consensus docking scheme. In this way eight selected compounds were identified. In addition, three compounds from the Library of Pharmacologically Active Compounds (LOPAC) were selected from the published results of high-throughput screening of this library. The inhibitory effects of these compounds were tested at a fixed concentration of 1 mM. The results showed that seven compounds inhibited LmiPGAM activity and of these, two compounds (one each from high-throughput and virtual screening) showed substantial inhibition (i.e. 14% and 49% remaining activity, respectively). Taken together, the findings from this study indicate that these compounds have potential as novel inhibitors that specifically target LmiPGAM.
format Article
author Ahmad Fuad, Fazia Adyani
Houston, Douglas Robert
Michels, Paul A M
Fothergill- Gilmore, Linda A.
Walkinshaw, Malcolm Douglas
author_facet Ahmad Fuad, Fazia Adyani
Houston, Douglas Robert
Michels, Paul A M
Fothergill- Gilmore, Linda A.
Walkinshaw, Malcolm Douglas
author_sort Ahmad Fuad, Fazia Adyani
title Inhibitors of leishmania mexicana phosphoglycerate mutase identified by virtual screening and verified by inhibition studies
title_short Inhibitors of leishmania mexicana phosphoglycerate mutase identified by virtual screening and verified by inhibition studies
title_full Inhibitors of leishmania mexicana phosphoglycerate mutase identified by virtual screening and verified by inhibition studies
title_fullStr Inhibitors of leishmania mexicana phosphoglycerate mutase identified by virtual screening and verified by inhibition studies
title_full_unstemmed Inhibitors of leishmania mexicana phosphoglycerate mutase identified by virtual screening and verified by inhibition studies
title_sort inhibitors of leishmania mexicana phosphoglycerate mutase identified by virtual screening and verified by inhibition studies
publisher Penerbit Universiti Kebangsaan Malaysia
publishDate 2016
url http://irep.iium.edu.my/53866/1/53866_Inhibitors%20of%20Leishmania.pdf
http://irep.iium.edu.my/53866/2/53866_Inhibitors%20of%20Leishmania_WOS.pdf
http://irep.iium.edu.my/53866/4/53866_Inhibitors%20of%20Leishmania_SCOPUS.pdf
http://irep.iium.edu.my/53866/
http://journalarticle.ukm.my/9986/1/14%20Fazia%20Adyani.pdf
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