Preliminary Results on the Whole Genome Analysis of a Vietnamese Individual
P. 31-35
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2017
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oai:112.137.131.14:VNU_123-566732017-09-30T16:30:40Z Preliminary Results on the Whole Genome Analysis of a Vietnamese Individual Dang, Thanh Hai Nguyen, Dai Thanh Pham, Thi Minh Trang Dang, Cao Cuong Hoang, Kim Phuc Pham, Bao Son Le, Sy Vinh Le, Si Quang Phan, Thi Thu Hang Do, Duc Dong Nguyen, Huu Duc High coverage whole genome sequencing Variant analysis Vietnamese human genome P. 31-35 We present preliminary results on the whole genome analysis of an anonymous Vietnamese individual of the Kinh ethnic group (KHV) that was deeply sequenced to 30-fold using the Illumina sequencing machines. The sequenced genome covered 99.8% of the human reference genome (GRCh37). We discovered (1) 3.4 million single polymorphism nucleotides (SNPs) of which 41,396 (1.2%) were novel, (2) 654 thousand short indels of which 35,263 (5.4%) were novel (i.e., not present in the dbSNP and the 1000 genomes project databases). We also detected 10,611 large structural variants (length ≥100 bp). This study is our initial step toward large-scale genome projects on Vietnamese population. 2017-08-14T02:38:53Z 2017-08-14T02:38:53Z 2014 Article 0866-8612 http://repository.vnu.edu.vn/handle/VNU_123/56673 en Vol. 30, No. 3 (2014); application/pdf ĐHQGHN |
| institution |
Vietnam National University, Hanoi |
| building |
VNU Library & Information Center |
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Vietnam |
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VNU Digital Repository |
| language |
English |
| topic |
High coverage whole genome sequencing Variant analysis Vietnamese human genome |
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High coverage whole genome sequencing Variant analysis Vietnamese human genome Dang, Thanh Hai Nguyen, Dai Thanh Pham, Thi Minh Trang Dang, Cao Cuong Hoang, Kim Phuc Pham, Bao Son Le, Sy Vinh Le, Si Quang Phan, Thi Thu Hang Do, Duc Dong Nguyen, Huu Duc Preliminary Results on the Whole Genome Analysis of a Vietnamese Individual |
| description |
P. 31-35 |
| format |
Article |
| author |
Dang, Thanh Hai Nguyen, Dai Thanh Pham, Thi Minh Trang Dang, Cao Cuong Hoang, Kim Phuc Pham, Bao Son Le, Sy Vinh Le, Si Quang Phan, Thi Thu Hang Do, Duc Dong Nguyen, Huu Duc |
| author_facet |
Dang, Thanh Hai Nguyen, Dai Thanh Pham, Thi Minh Trang Dang, Cao Cuong Hoang, Kim Phuc Pham, Bao Son Le, Sy Vinh Le, Si Quang Phan, Thi Thu Hang Do, Duc Dong Nguyen, Huu Duc |
| author_sort |
Dang, Thanh Hai |
| title |
Preliminary Results on the Whole Genome Analysis of a Vietnamese Individual |
| title_short |
Preliminary Results on the Whole Genome Analysis of a Vietnamese Individual |
| title_full |
Preliminary Results on the Whole Genome Analysis of a Vietnamese Individual |
| title_fullStr |
Preliminary Results on the Whole Genome Analysis of a Vietnamese Individual |
| title_full_unstemmed |
Preliminary Results on the Whole Genome Analysis of a Vietnamese Individual |
| title_sort |
preliminary results on the whole genome analysis of a vietnamese individual |
| publisher |
ĐHQGHN |
| publishDate |
2017 |
| url |
http://repository.vnu.edu.vn/handle/VNU_123/56673 |
| _version_ |
1680966193600528384 |