A 3D-printed magnetic digital microfluidic diagnostic platform for rapid colorimetric sensing of carbapenemase-producing enterobacteriaceae

Carbapenemase-producing Enterobacteriaceae (CPE) are a group of drug-resistant Gram-negative pathogens that are classified as a critical threat by the World Health Organization (WHO). Conventional methods of detecting antibiotic-resistant pathogens do not assess the resistance mechanism and are ofte...

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Main Authors: Kanitthamniyom, Pojchanun, Hon, Pei Yun, Zhou, Aiwu, Mohammad Yazid Abdad, Leow, Zhi Yun, Nurhidayah Mohamed Yazid, Lim, Vanessa Wei Xun, Vasoo, Shawn, Zhang, Yi
Other Authors: School of Mechanical and Aerospace Engineering
Format: Article
Language:English
Published: 2021
Subjects:
Online Access:https://hdl.handle.net/10356/151954
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Institution: Nanyang Technological University
Language: English
id sg-ntu-dr.10356-151954
record_format dspace
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic Engineering::Mechanical engineering
Modified Hodge Test
Resistant Enterobacteriaceae
spellingShingle Engineering::Mechanical engineering
Modified Hodge Test
Resistant Enterobacteriaceae
Kanitthamniyom, Pojchanun
Hon, Pei Yun
Zhou, Aiwu
Mohammad Yazid Abdad
Leow, Zhi Yun
Nurhidayah Mohamed Yazid
Lim, Vanessa Wei Xun
Vasoo, Shawn
Zhang, Yi
A 3D-printed magnetic digital microfluidic diagnostic platform for rapid colorimetric sensing of carbapenemase-producing enterobacteriaceae
description Carbapenemase-producing Enterobacteriaceae (CPE) are a group of drug-resistant Gram-negative pathogens that are classified as a critical threat by the World Health Organization (WHO). Conventional methods of detecting antibiotic-resistant pathogens do not assess the resistance mechanism and are often time-consuming and laborious. We have developed a magnetic digital microfluidic (MDM) platform, known as MDM Carba, for the identification of CPE by measuring their ability to hydrolyze carbapenem antibiotics. MDM Carba offers the ability to rapidly test CPE and reduce the amount of reagents used compared with conventional phenotypic testing. On the MDM Carba platform, tests are performed in droplets that function as reaction chambers, and fluidic operations are accomplished by manipulating these droplets with magnetic force. The simple droplet-based magnetic fluidic operation allows easy system automation and simplified hands-on operation. Because of the unique “power-free” operation of MDM technology, the MDM Carba platform can also be operated manually, showing great potential for point-of-care testing in resource-limited settings. We tested 27 bacterial isolates on the MDM Carba platform, and the results showed sensitivity and specificity that were comparable to those of the widely used Carba NP test. MDM Carba may shorten the overall turnaround time for CPE identification, thereby enabling more timely clinical decisions for better clinical outcomes. MDM Carba is a technological platform that can be further developed to improve diagnostics for other types of antibiotic resistance with minor modifications.
author2 School of Mechanical and Aerospace Engineering
author_facet School of Mechanical and Aerospace Engineering
Kanitthamniyom, Pojchanun
Hon, Pei Yun
Zhou, Aiwu
Mohammad Yazid Abdad
Leow, Zhi Yun
Nurhidayah Mohamed Yazid
Lim, Vanessa Wei Xun
Vasoo, Shawn
Zhang, Yi
format Article
author Kanitthamniyom, Pojchanun
Hon, Pei Yun
Zhou, Aiwu
Mohammad Yazid Abdad
Leow, Zhi Yun
Nurhidayah Mohamed Yazid
Lim, Vanessa Wei Xun
Vasoo, Shawn
Zhang, Yi
author_sort Kanitthamniyom, Pojchanun
title A 3D-printed magnetic digital microfluidic diagnostic platform for rapid colorimetric sensing of carbapenemase-producing enterobacteriaceae
title_short A 3D-printed magnetic digital microfluidic diagnostic platform for rapid colorimetric sensing of carbapenemase-producing enterobacteriaceae
title_full A 3D-printed magnetic digital microfluidic diagnostic platform for rapid colorimetric sensing of carbapenemase-producing enterobacteriaceae
title_fullStr A 3D-printed magnetic digital microfluidic diagnostic platform for rapid colorimetric sensing of carbapenemase-producing enterobacteriaceae
title_full_unstemmed A 3D-printed magnetic digital microfluidic diagnostic platform for rapid colorimetric sensing of carbapenemase-producing enterobacteriaceae
title_sort 3d-printed magnetic digital microfluidic diagnostic platform for rapid colorimetric sensing of carbapenemase-producing enterobacteriaceae
publishDate 2021
url https://hdl.handle.net/10356/151954
_version_ 1718368024857149440
spelling sg-ntu-dr.10356-1519542021-10-30T20:12:04Z A 3D-printed magnetic digital microfluidic diagnostic platform for rapid colorimetric sensing of carbapenemase-producing enterobacteriaceae Kanitthamniyom, Pojchanun Hon, Pei Yun Zhou, Aiwu Mohammad Yazid Abdad Leow, Zhi Yun Nurhidayah Mohamed Yazid Lim, Vanessa Wei Xun Vasoo, Shawn Zhang, Yi School of Mechanical and Aerospace Engineering Lee Kong Chian School of Medicine (LKCMedicine) Singapore Centre for 3D Printing Engineering::Mechanical engineering Modified Hodge Test Resistant Enterobacteriaceae Carbapenemase-producing Enterobacteriaceae (CPE) are a group of drug-resistant Gram-negative pathogens that are classified as a critical threat by the World Health Organization (WHO). Conventional methods of detecting antibiotic-resistant pathogens do not assess the resistance mechanism and are often time-consuming and laborious. We have developed a magnetic digital microfluidic (MDM) platform, known as MDM Carba, for the identification of CPE by measuring their ability to hydrolyze carbapenem antibiotics. MDM Carba offers the ability to rapidly test CPE and reduce the amount of reagents used compared with conventional phenotypic testing. On the MDM Carba platform, tests are performed in droplets that function as reaction chambers, and fluidic operations are accomplished by manipulating these droplets with magnetic force. The simple droplet-based magnetic fluidic operation allows easy system automation and simplified hands-on operation. Because of the unique “power-free” operation of MDM technology, the MDM Carba platform can also be operated manually, showing great potential for point-of-care testing in resource-limited settings. We tested 27 bacterial isolates on the MDM Carba platform, and the results showed sensitivity and specificity that were comparable to those of the widely used Carba NP test. MDM Carba may shorten the overall turnaround time for CPE identification, thereby enabling more timely clinical decisions for better clinical outcomes. MDM Carba is a technological platform that can be further developed to improve diagnostics for other types of antibiotic resistance with minor modifications. Ministry of Education (MOE) Nanyang Technological University Published version The authors would like to thank Scott Cunningham and Robin Patel from the Mayo Clinic, Rochester, MN, for sharing the reference isolates used in this study and Lew Wen Siang and Gerard Joseph Lim at Nanyang Technological University, Singapore, for helping with vibrating-sample magnetometer measurements. Yi Zhang and Shawn Vasoo are grateful for the funding support from NTUitive Gap Fund NGF-2020-08-002. Yi Zhang is thankful for funding support from the Singapore Ministry of Education Grant Tier 1 RG39/19 and the Nanyang Technological University Startup Grant. 2021-10-26T05:28:30Z 2021-10-26T05:28:30Z 2021 Journal Article Kanitthamniyom, P., Hon, P. Y., Zhou, A., Mohammad Yazid Abdad, Leow, Z. Y., Nurhidayah Mohamed Yazid, Lim, V. W. X., Vasoo, S. & Zhang, Y. (2021). A 3D-printed magnetic digital microfluidic diagnostic platform for rapid colorimetric sensing of carbapenemase-producing enterobacteriaceae. Microsystems and Nanoengineering, 7(1), 47-. https://dx.doi.org/10.1038/s41378-021-00276-9 2096-1030 https://hdl.handle.net/10356/151954 10.1038/s41378-021-00276-9 2-s2.0-85107744693 1 7 47 en NGF-2020-08-002 RG39/19 Microsystems and Nanoengineering © 2021 The Author(s). Open Access. This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. application/pdf