A new combinatorial megaplasmid library assembly method designed to screen for minimal pathways by using SCRaMbLE

Human proteins expressed in yeast are common to enhance protein production while the expression of functional human pathways remain challenging. Here, we propose a simple and economical high-throughput gene assembly method to create a yeast megaplasmid library from human cDNA to screen for minimal h...

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Main Authors: Yap, Wei Sheng, Thibault, Guillaume
Other Authors: School of Biological Sciences
Format: Article
Language:English
Published: 2023
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Online Access:https://hdl.handle.net/10356/165616
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Institution: Nanyang Technological University
Language: English
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spelling sg-ntu-dr.10356-1656162023-04-10T15:33:43Z A new combinatorial megaplasmid library assembly method designed to screen for minimal pathways by using SCRaMbLE Yap, Wei Sheng Thibault, Guillaume School of Biological Sciences Mechanobiology Institute, NUS Institute of Molecular and Cell Biology, A*STAR Science::Biological sciences Gene Assembly Method SCRaMbLE Human proteins expressed in yeast are common to enhance protein production while the expression of functional human pathways remain challenging. Here, we propose a simple and economical high-throughput gene assembly method to create a yeast megaplasmid library from human cDNA to screen for minimal human functional pathways. We introduced artificial promoters followed by symmetric loxP sites into the megaplasmids using Golden Gate assembly coupled with streptavidin-bead-based purification. The isolated high molecular weight, randomly assembled cDNA megaplasmid library may be useful for high-throughput directed evolution experiments and may be adapted for use in other model organisms. National Research Foundation (NRF) Published version This work was supported by the National Research Foundation, Singapore, under its NRF-NSFC joint research grant call (NRF2018NRFNSFC003SB-006 to G.T.). 2023-04-04T06:08:59Z 2023-04-04T06:08:59Z 2022 Journal Article Yap, W. S. & Thibault, G. (2022). A new combinatorial megaplasmid library assembly method designed to screen for minimal pathways by using SCRaMbLE. MicroPublication Biology, 2022. https://dx.doi.org/10.17912/micropub.biology.000657 2578-9430 https://hdl.handle.net/10356/165616 10.17912/micropub.biology.000657 36389121 2022 en NRF2018NRFNSFC003SB-006 microPublication Biology 10.21979/N9/XKMAEX © 2022 by the authors. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International (CC BY 4.0) License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic Science::Biological sciences
Gene Assembly Method
SCRaMbLE
spellingShingle Science::Biological sciences
Gene Assembly Method
SCRaMbLE
Yap, Wei Sheng
Thibault, Guillaume
A new combinatorial megaplasmid library assembly method designed to screen for minimal pathways by using SCRaMbLE
description Human proteins expressed in yeast are common to enhance protein production while the expression of functional human pathways remain challenging. Here, we propose a simple and economical high-throughput gene assembly method to create a yeast megaplasmid library from human cDNA to screen for minimal human functional pathways. We introduced artificial promoters followed by symmetric loxP sites into the megaplasmids using Golden Gate assembly coupled with streptavidin-bead-based purification. The isolated high molecular weight, randomly assembled cDNA megaplasmid library may be useful for high-throughput directed evolution experiments and may be adapted for use in other model organisms.
author2 School of Biological Sciences
author_facet School of Biological Sciences
Yap, Wei Sheng
Thibault, Guillaume
format Article
author Yap, Wei Sheng
Thibault, Guillaume
author_sort Yap, Wei Sheng
title A new combinatorial megaplasmid library assembly method designed to screen for minimal pathways by using SCRaMbLE
title_short A new combinatorial megaplasmid library assembly method designed to screen for minimal pathways by using SCRaMbLE
title_full A new combinatorial megaplasmid library assembly method designed to screen for minimal pathways by using SCRaMbLE
title_fullStr A new combinatorial megaplasmid library assembly method designed to screen for minimal pathways by using SCRaMbLE
title_full_unstemmed A new combinatorial megaplasmid library assembly method designed to screen for minimal pathways by using SCRaMbLE
title_sort new combinatorial megaplasmid library assembly method designed to screen for minimal pathways by using scramble
publishDate 2023
url https://hdl.handle.net/10356/165616
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