Selective binding of retrotransposons by ZFP352 facilitates the timely dissolution of totipotency network

Acquisition of new stem cell fates relies on the dissolution of the prior regulatory network sustaining the existing cell fates. Currently, extensive insights have been revealed for the totipotency regulatory network around the zygotic genome activation (ZGA) period. However, how the dissolution of...

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Main Authors: Li, Zhengyi, Xu, Haiyan, Li, Jiaqun, Xu, Xiao, Wang, Junjiao, Wu, Danya, Zhang, Jiateng, Liu, Juan, Xue, Ziwei, Zhan, Guankai, Tan, Bobby Cheng Peow, Chen, Di, Chan, Yun-Shen, Ng, Huck Hui, Liu, Wanlu, Hsu, Chih-Hung, Zhang, Dan, Shen, Yang, Liang, Hongqing
Other Authors: School of Biological Sciences
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Language:English
Published: 2023
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Online Access:https://hdl.handle.net/10356/169767
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spelling sg-ntu-dr.10356-1697672023-08-07T15:32:07Z Selective binding of retrotransposons by ZFP352 facilitates the timely dissolution of totipotency network Li, Zhengyi Xu, Haiyan Li, Jiaqun Xu, Xiao Wang, Junjiao Wu, Danya Zhang, Jiateng Liu, Juan Xue, Ziwei Zhan, Guankai Tan, Bobby Cheng Peow Chen, Di Chan, Yun-Shen Ng, Huck Hui Liu, Wanlu Hsu, Chih-Hung Zhang, Dan Shen, Yang Liang, Hongqing School of Biological Sciences Genome Institute of Singapore, A*STAR Department of Biological Sciences, NUS Science::Biological sciences Embryo Development Gene Expression Regulation Acquisition of new stem cell fates relies on the dissolution of the prior regulatory network sustaining the existing cell fates. Currently, extensive insights have been revealed for the totipotency regulatory network around the zygotic genome activation (ZGA) period. However, how the dissolution of the totipotency network is triggered to ensure the timely embryonic development following ZGA is largely unknown. In this study, we identify the unexpected role of a highly expressed 2-cell (2C) embryo specific transcription factor, ZFP352, in facilitating the dissolution of the totipotency network. We find that ZFP352 has selective binding towards two different retrotransposon sub-families. ZFP352 coordinates with DUX to bind the 2C specific MT2_Mm sub-family. On the other hand, without DUX, ZFP352 switches affinity to bind extensively onto SINE_B1/Alu sub-family. This leads to the activation of later developmental programs like ubiquitination pathways, to facilitate the dissolution of the 2C state. Correspondingly, depleting ZFP352 in mouse embryos delays the 2C to morula transition process. Thus, through a shift of binding from MT2_Mm to SINE_B1/Alu, ZFP352 can trigger spontaneous dissolution of the totipotency network. Our study highlights the importance of different retrotransposons sub-families in facilitating the timely and programmed cell fates transition during early embryogenesis. Ministry of Health (MOH) National Medical Research Council (NMRC) Published version This project is funded by the National Key Research and Development Program of China (No. 2022YFC2703500, D.Z.; 2021YFC2700601, D.Z.), National Natural Science Foundation of China (No. 32250610202, H.L.; 31871372, H.L.; 81974224, D.Z.), Key Research and Development Program of Zhejiang Province (LZ22C120002, H.L.; 2021C03098, D.Z.), Zhejiang University Basic Research Funding (226-2022-00206, H.L.), and the Singapore Ministry of Health’s National Medical Research Council under the Open Fund Individual Research Grant (OFIRG16nov021, H.H.N.). 2023-08-02T05:00:53Z 2023-08-02T05:00:53Z 2023 Journal Article Li, Z., Xu, H., Li, J., Xu, X., Wang, J., Wu, D., Zhang, J., Liu, J., Xue, Z., Zhan, G., Tan, B. C. P., Chen, D., Chan, Y., Ng, H. H., Liu, W., Hsu, C., Zhang, D., Shen, Y. & Liang, H. (2023). Selective binding of retrotransposons by ZFP352 facilitates the timely dissolution of totipotency network. Nature Communications, 14(1). https://dx.doi.org/10.1038/s41467-023-39344-1 2041-1723 https://hdl.handle.net/10356/169767 10.1038/s41467-023-39344-1 14 2-s2.0-85162237388 1 14 en OFIRG16nov021 Nature Communications © The Author(s) 2023. Open Access. This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/ licenses/by/4.0/. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic Science::Biological sciences
Embryo Development
Gene Expression Regulation
spellingShingle Science::Biological sciences
Embryo Development
Gene Expression Regulation
Li, Zhengyi
Xu, Haiyan
Li, Jiaqun
Xu, Xiao
Wang, Junjiao
Wu, Danya
Zhang, Jiateng
Liu, Juan
Xue, Ziwei
Zhan, Guankai
Tan, Bobby Cheng Peow
Chen, Di
Chan, Yun-Shen
Ng, Huck Hui
Liu, Wanlu
Hsu, Chih-Hung
Zhang, Dan
Shen, Yang
Liang, Hongqing
Selective binding of retrotransposons by ZFP352 facilitates the timely dissolution of totipotency network
description Acquisition of new stem cell fates relies on the dissolution of the prior regulatory network sustaining the existing cell fates. Currently, extensive insights have been revealed for the totipotency regulatory network around the zygotic genome activation (ZGA) period. However, how the dissolution of the totipotency network is triggered to ensure the timely embryonic development following ZGA is largely unknown. In this study, we identify the unexpected role of a highly expressed 2-cell (2C) embryo specific transcription factor, ZFP352, in facilitating the dissolution of the totipotency network. We find that ZFP352 has selective binding towards two different retrotransposon sub-families. ZFP352 coordinates with DUX to bind the 2C specific MT2_Mm sub-family. On the other hand, without DUX, ZFP352 switches affinity to bind extensively onto SINE_B1/Alu sub-family. This leads to the activation of later developmental programs like ubiquitination pathways, to facilitate the dissolution of the 2C state. Correspondingly, depleting ZFP352 in mouse embryos delays the 2C to morula transition process. Thus, through a shift of binding from MT2_Mm to SINE_B1/Alu, ZFP352 can trigger spontaneous dissolution of the totipotency network. Our study highlights the importance of different retrotransposons sub-families in facilitating the timely and programmed cell fates transition during early embryogenesis.
author2 School of Biological Sciences
author_facet School of Biological Sciences
Li, Zhengyi
Xu, Haiyan
Li, Jiaqun
Xu, Xiao
Wang, Junjiao
Wu, Danya
Zhang, Jiateng
Liu, Juan
Xue, Ziwei
Zhan, Guankai
Tan, Bobby Cheng Peow
Chen, Di
Chan, Yun-Shen
Ng, Huck Hui
Liu, Wanlu
Hsu, Chih-Hung
Zhang, Dan
Shen, Yang
Liang, Hongqing
format Article
author Li, Zhengyi
Xu, Haiyan
Li, Jiaqun
Xu, Xiao
Wang, Junjiao
Wu, Danya
Zhang, Jiateng
Liu, Juan
Xue, Ziwei
Zhan, Guankai
Tan, Bobby Cheng Peow
Chen, Di
Chan, Yun-Shen
Ng, Huck Hui
Liu, Wanlu
Hsu, Chih-Hung
Zhang, Dan
Shen, Yang
Liang, Hongqing
author_sort Li, Zhengyi
title Selective binding of retrotransposons by ZFP352 facilitates the timely dissolution of totipotency network
title_short Selective binding of retrotransposons by ZFP352 facilitates the timely dissolution of totipotency network
title_full Selective binding of retrotransposons by ZFP352 facilitates the timely dissolution of totipotency network
title_fullStr Selective binding of retrotransposons by ZFP352 facilitates the timely dissolution of totipotency network
title_full_unstemmed Selective binding of retrotransposons by ZFP352 facilitates the timely dissolution of totipotency network
title_sort selective binding of retrotransposons by zfp352 facilitates the timely dissolution of totipotency network
publishDate 2023
url https://hdl.handle.net/10356/169767
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