Physics-guided neural network for tissue optical properties estimation

Finding the optical properties of tissue is essential for various biomedical diagnostic/therapeutic applications such as monitoring of blood oxygenation, tissue metabolism, skin imaging, photodynamic therapy, low-level laser therapy, and photo-thermal therapy. Hence, the research for more accurate a...

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Main Authors: Chong, Kian Chee, Pramanik, Manojit
Other Authors: School of Chemistry, Chemical Engineering and Biotechnology
Format: Article
Language:English
Published: 2023
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Online Access:https://hdl.handle.net/10356/171480
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Institution: Nanyang Technological University
Language: English
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spelling sg-ntu-dr.10356-1714802023-10-27T15:31:55Z Physics-guided neural network for tissue optical properties estimation Chong, Kian Chee Pramanik, Manojit School of Chemistry, Chemical Engineering and Biotechnology Science::Chemistry Biological Tissue Reflectance Finding the optical properties of tissue is essential for various biomedical diagnostic/therapeutic applications such as monitoring of blood oxygenation, tissue metabolism, skin imaging, photodynamic therapy, low-level laser therapy, and photo-thermal therapy. Hence, the research for more accurate and versatile optical properties estimation techniques has always been a primary interest of researchers, especially in the field of bioimaging and bio-optics. In the past, most of the prediction methods were based on physics-based models such as the pronounced diffusion approximation method. In more recent years, with the advancement and growing popularity of machine learning techniques, most of the prediction methods are data-driven. While both methods have been proven to be useful, each of them suffers from several shortcomings that could be complemented by their counterparts. Thus, there is a need to bring the two domains together to obtain superior prediction accuracy and generalizability. In this work, we proposed a physics-guided neural network (PGNN) for tissue optical properties regression which integrates physics prior and constraint into the artificial neural network (ANN) model. With this method, we have demonstrated superior generalizability of PGNN compared to its pure ANN counterpart. The prediction accuracy and generalizability of the network were evaluated on single-layered tissue samples simulated with Monte Carlo simulation. Two different test datasets, the in-domain test dataset and out-domain dataset were used to evaluate in-domain generalizability and out-domain generalizability, respectively. The physics-guided neural network (PGNN) showed superior generalizability for both in-domain and out-domain prediction compared to pure ANN. Published version 2023-10-26T03:10:09Z 2023-10-26T03:10:09Z 2023 Journal Article Chong, K. C. & Pramanik, M. (2023). Physics-guided neural network for tissue optical properties estimation. Biomedical Optics Express, 14(6), 2576-2590. https://dx.doi.org/10.1364/BOE.487179 2156-7085 https://hdl.handle.net/10356/171480 10.1364/BOE.487179 37342718 2-s2.0-85161984330 6 14 2576 2590 en Biomedical Optics Express © 2023 Optica Publishing Group under the terms of the Optica Open Access Publishing Agreement/ application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic Science::Chemistry
Biological Tissue
Reflectance
spellingShingle Science::Chemistry
Biological Tissue
Reflectance
Chong, Kian Chee
Pramanik, Manojit
Physics-guided neural network for tissue optical properties estimation
description Finding the optical properties of tissue is essential for various biomedical diagnostic/therapeutic applications such as monitoring of blood oxygenation, tissue metabolism, skin imaging, photodynamic therapy, low-level laser therapy, and photo-thermal therapy. Hence, the research for more accurate and versatile optical properties estimation techniques has always been a primary interest of researchers, especially in the field of bioimaging and bio-optics. In the past, most of the prediction methods were based on physics-based models such as the pronounced diffusion approximation method. In more recent years, with the advancement and growing popularity of machine learning techniques, most of the prediction methods are data-driven. While both methods have been proven to be useful, each of them suffers from several shortcomings that could be complemented by their counterparts. Thus, there is a need to bring the two domains together to obtain superior prediction accuracy and generalizability. In this work, we proposed a physics-guided neural network (PGNN) for tissue optical properties regression which integrates physics prior and constraint into the artificial neural network (ANN) model. With this method, we have demonstrated superior generalizability of PGNN compared to its pure ANN counterpart. The prediction accuracy and generalizability of the network were evaluated on single-layered tissue samples simulated with Monte Carlo simulation. Two different test datasets, the in-domain test dataset and out-domain dataset were used to evaluate in-domain generalizability and out-domain generalizability, respectively. The physics-guided neural network (PGNN) showed superior generalizability for both in-domain and out-domain prediction compared to pure ANN.
author2 School of Chemistry, Chemical Engineering and Biotechnology
author_facet School of Chemistry, Chemical Engineering and Biotechnology
Chong, Kian Chee
Pramanik, Manojit
format Article
author Chong, Kian Chee
Pramanik, Manojit
author_sort Chong, Kian Chee
title Physics-guided neural network for tissue optical properties estimation
title_short Physics-guided neural network for tissue optical properties estimation
title_full Physics-guided neural network for tissue optical properties estimation
title_fullStr Physics-guided neural network for tissue optical properties estimation
title_full_unstemmed Physics-guided neural network for tissue optical properties estimation
title_sort physics-guided neural network for tissue optical properties estimation
publishDate 2023
url https://hdl.handle.net/10356/171480
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