Tree architecture: a strigolactone-deficient mutant reveals a connection between branching order and auxin gradient along the tree stem

Due to their long lifespan, trees and bushes develop higher order of branches in a perennial manner. In contrast to a tall tree, with a clearly defined main stem and branching order, a bush is shorter and has a less apparent main stem and branching pattern. To address the developmental basis of thes...

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Main Authors: Su, Chang, Kokosza, Andrzej, Xie, Xiaonan, Pěnčík, Aleš, Zhang, Youjun, Raumonen, Pasi, Shi, Xueping, Muranen, Sampo, Topcu, Melis Kucukoglu, Immanen, Juha, Hagqvist, Risto, Safronov, Omid, Alonso-Serra, Juan, Eswaran, Gugan, Venegas, Mirko Pavicic, Ljung, Karin, Ward, Sally, Mähönen, Ari Pekka, Himanen, Kristiina, Salojärvi, Jarkko, Fernie, Alisdair R., Novák, Ondřej, Leyser, Ottoline, Pałubicki, Wojtek, Helariutta, Ykä, Nieminen, Kaisa
Other Authors: School of Biological Sciences
Format: Article
Language:English
Published: 2024
Subjects:
Online Access:https://hdl.handle.net/10356/174092
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Institution: Nanyang Technological University
Language: English
id sg-ntu-dr.10356-174092
record_format dspace
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic Earth and Environmental Sciences
Medicine, Health and Life Sciences
Tree architecture
Branching modeling
spellingShingle Earth and Environmental Sciences
Medicine, Health and Life Sciences
Tree architecture
Branching modeling
Su, Chang
Kokosza, Andrzej
Xie, Xiaonan
Pěnčík, Aleš
Zhang, Youjun
Raumonen, Pasi
Shi, Xueping
Muranen, Sampo
Topcu, Melis Kucukoglu
Immanen, Juha
Hagqvist, Risto
Safronov, Omid
Alonso-Serra, Juan
Eswaran, Gugan
Venegas, Mirko Pavicic
Ljung, Karin
Ward, Sally
Mähönen, Ari Pekka
Himanen, Kristiina
Salojärvi, Jarkko
Fernie, Alisdair R.
Novák, Ondřej
Leyser, Ottoline
Pałubicki, Wojtek
Helariutta, Ykä
Nieminen, Kaisa
Tree architecture: a strigolactone-deficient mutant reveals a connection between branching order and auxin gradient along the tree stem
description Due to their long lifespan, trees and bushes develop higher order of branches in a perennial manner. In contrast to a tall tree, with a clearly defined main stem and branching order, a bush is shorter and has a less apparent main stem and branching pattern. To address the developmental basis of these two forms, we studied several naturally occurring architectural variants in silver birch (Betula pendula). Using a candidate gene approach, we identified a bushy kanttarelli variant with a loss-of-function mutation in the BpMAX1 gene required for strigolactone (SL) biosynthesis. While kanttarelli is shorter than the wild type (WT), it has the same number of primary branches, whereas the number of secondary branches is increased, contributing to its bush-like phenotype. To confirm that the identified mutation was responsible for the phenotype, we phenocopied kanttarelli in transgenic BpMAX1::RNAi birch lines. SL profiling confirmed that both kanttarelli and the transgenic lines produced very limited amounts of SL. Interestingly, the auxin (IAA) distribution along the main stem differed between WT and BpMAX1::RNAi. In the WT, the auxin concentration formed a gradient, being higher in the uppermost internodes and decreasing toward the basal part of the stem, whereas in the transgenic line, this gradient was not observed. Through modeling, we showed that the different IAA distribution patterns may result from the difference in the number of higher-order branches and plant height. Future studies will determine whether the IAA gradient itself regulates aspects of plant architecture.
author2 School of Biological Sciences
author_facet School of Biological Sciences
Su, Chang
Kokosza, Andrzej
Xie, Xiaonan
Pěnčík, Aleš
Zhang, Youjun
Raumonen, Pasi
Shi, Xueping
Muranen, Sampo
Topcu, Melis Kucukoglu
Immanen, Juha
Hagqvist, Risto
Safronov, Omid
Alonso-Serra, Juan
Eswaran, Gugan
Venegas, Mirko Pavicic
Ljung, Karin
Ward, Sally
Mähönen, Ari Pekka
Himanen, Kristiina
Salojärvi, Jarkko
Fernie, Alisdair R.
Novák, Ondřej
Leyser, Ottoline
Pałubicki, Wojtek
Helariutta, Ykä
Nieminen, Kaisa
format Article
author Su, Chang
Kokosza, Andrzej
Xie, Xiaonan
Pěnčík, Aleš
Zhang, Youjun
Raumonen, Pasi
Shi, Xueping
Muranen, Sampo
Topcu, Melis Kucukoglu
Immanen, Juha
Hagqvist, Risto
Safronov, Omid
Alonso-Serra, Juan
Eswaran, Gugan
Venegas, Mirko Pavicic
Ljung, Karin
Ward, Sally
Mähönen, Ari Pekka
Himanen, Kristiina
Salojärvi, Jarkko
Fernie, Alisdair R.
Novák, Ondřej
Leyser, Ottoline
Pałubicki, Wojtek
Helariutta, Ykä
Nieminen, Kaisa
author_sort Su, Chang
title Tree architecture: a strigolactone-deficient mutant reveals a connection between branching order and auxin gradient along the tree stem
title_short Tree architecture: a strigolactone-deficient mutant reveals a connection between branching order and auxin gradient along the tree stem
title_full Tree architecture: a strigolactone-deficient mutant reveals a connection between branching order and auxin gradient along the tree stem
title_fullStr Tree architecture: a strigolactone-deficient mutant reveals a connection between branching order and auxin gradient along the tree stem
title_full_unstemmed Tree architecture: a strigolactone-deficient mutant reveals a connection between branching order and auxin gradient along the tree stem
title_sort tree architecture: a strigolactone-deficient mutant reveals a connection between branching order and auxin gradient along the tree stem
publishDate 2024
url https://hdl.handle.net/10356/174092
_version_ 1794549350646415360
spelling sg-ntu-dr.10356-1740922024-03-18T15:32:26Z Tree architecture: a strigolactone-deficient mutant reveals a connection between branching order and auxin gradient along the tree stem Su, Chang Kokosza, Andrzej Xie, Xiaonan Pěnčík, Aleš Zhang, Youjun Raumonen, Pasi Shi, Xueping Muranen, Sampo Topcu, Melis Kucukoglu Immanen, Juha Hagqvist, Risto Safronov, Omid Alonso-Serra, Juan Eswaran, Gugan Venegas, Mirko Pavicic Ljung, Karin Ward, Sally Mähönen, Ari Pekka Himanen, Kristiina Salojärvi, Jarkko Fernie, Alisdair R. Novák, Ondřej Leyser, Ottoline Pałubicki, Wojtek Helariutta, Ykä Nieminen, Kaisa School of Biological Sciences Earth and Environmental Sciences Medicine, Health and Life Sciences Tree architecture Branching modeling Due to their long lifespan, trees and bushes develop higher order of branches in a perennial manner. In contrast to a tall tree, with a clearly defined main stem and branching order, a bush is shorter and has a less apparent main stem and branching pattern. To address the developmental basis of these two forms, we studied several naturally occurring architectural variants in silver birch (Betula pendula). Using a candidate gene approach, we identified a bushy kanttarelli variant with a loss-of-function mutation in the BpMAX1 gene required for strigolactone (SL) biosynthesis. While kanttarelli is shorter than the wild type (WT), it has the same number of primary branches, whereas the number of secondary branches is increased, contributing to its bush-like phenotype. To confirm that the identified mutation was responsible for the phenotype, we phenocopied kanttarelli in transgenic BpMAX1::RNAi birch lines. SL profiling confirmed that both kanttarelli and the transgenic lines produced very limited amounts of SL. Interestingly, the auxin (IAA) distribution along the main stem differed between WT and BpMAX1::RNAi. In the WT, the auxin concentration formed a gradient, being higher in the uppermost internodes and decreasing toward the basal part of the stem, whereas in the transgenic line, this gradient was not observed. Through modeling, we showed that the different IAA distribution patterns may result from the difference in the number of higher-order branches and plant height. Future studies will determine whether the IAA gradient itself regulates aspects of plant architecture. Published version The work was funded by the European Research Council (ERC SYMDEV 323052, ERC- CoG CORKtheCAMBIA 819422), Academy of Finland Center of Excellence in Molecular Biology of Primary Producers (AoF CoE 271832) and CoE in Tree Biology (TreeBio AoF CoE 346139; 346141), University of Helsinki award (799992091), Gatsby Foundation (GAT3395/PR3 and GAT3272C), Academy Professor (AoF 345137), Jane and Aatos Erkko Foundation (200003), Bill & Melinda Gates Foundation (OPP1207956), Academy Project Funding (AoF 286404 and 322690, Chinese Government Scholarship (201506600037), European Union’s Horizon 2020 project PlantaSYST (SGA- CSA No 664621 and No 739582 under FPA No. 664620), European Regional Development Fund- Project (CZ.02.1.01/0.0/0.0/16_019/0000827), Academy of Finland Postdoctoral Researcher (AoF 326036), Academy Research Fellow (AoF 347130 and 353537), Suomen Luonnonvarain tut-kimussäätiö (SLTS 20220013/20230059), Knut and Alice Wallenberg Foundation (KAW 2016.0352 and KAW 2020.0240), and Swedish Governmental Agency for Innovation Systems (VINNOVA 2016- 00504). 2024-03-15T05:06:51Z 2024-03-15T05:06:51Z 2023 Journal Article Su, C., Kokosza, A., Xie, X., Pěnčík, A., Zhang, Y., Raumonen, P., Shi, X., Muranen, S., Topcu, M. K., Immanen, J., Hagqvist, R., Safronov, O., Alonso-Serra, J., Eswaran, G., Venegas, M. P., Ljung, K., Ward, S., Mähönen, A. P., Himanen, K., ...Nieminen, K. (2023). Tree architecture: a strigolactone-deficient mutant reveals a connection between branching order and auxin gradient along the tree stem. Proceedings of the National Academy of Sciences of the United States of America, 120(48), e2308587120-. https://dx.doi.org/10.1073/pnas.2308587120 1091-6490 https://hdl.handle.net/10356/174092 10.1073/pnas.2308587120 37991945 2-s2.0-85177837708 48 120 e2308587120 en Proceedings of the National Academy of Sciences of the United States of America © 2023 the Author(s). Published by PNAS. This open access article is distributed under Creative Commons Attribution- NonCommercial- NoDerivatives License 4.0 (CC BY- NC- ND). application/pdf