Optimization of tobacco etch virus (TEV) protease cleavage in fusion proteins.

This report summarizes the study of tobacco etch virus protease (TEVp) cleavage efficiency to enhance the productivity of antimicrobial peptide human beta-defensin (HBD) 25, a promising new class of antibiotics. Four parameters were investigated: salt concentration, substrate to enzyme ratio, cleava...

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Main Author: Yaohari, Hazarki.
Other Authors: Susanna Leong Su Jan
Format: Final Year Project
Language:English
Published: 2010
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Online Access:http://hdl.handle.net/10356/39819
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Institution: Nanyang Technological University
Language: English
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spelling sg-ntu-dr.10356-398192023-03-03T15:34:37Z Optimization of tobacco etch virus (TEV) protease cleavage in fusion proteins. Yaohari, Hazarki. Susanna Leong Su Jan School of Chemical and Biomedical Engineering DRNTU::Engineering::Chemical engineering::Biotechnological production This report summarizes the study of tobacco etch virus protease (TEVp) cleavage efficiency to enhance the productivity of antimicrobial peptide human beta-defensin (HBD) 25, a promising new class of antibiotics. Four parameters were investigated: salt concentration, substrate to enzyme ratio, cleavage time and pH. To avoid antimicrobial activity towards the host, the HBD 25 was expressed as a soluble fusion with maltose-binding protein (MBP) in Escherichia coli. Luria-Bertani (LB) was used as the culture medium for E. coli BL21 (DE3). The MBP-HBD25 fusion protein was then cleaved by the TEVp digestion enzyme at room temperature (25°C) in various conditions. The highest yield of HBD25 target peptide was obtained after 6 h of cleavage when 50 mM Tris-HCl, 2 M urea (pH = 8) digestion buffer was used, with 5:1 substrate to enzyme weight ratio. An HBD25 concentration of 0.032 g/l in the cleavage product solution was achieved with the mentioned cleavage condition. The cleavage recovery and yield were 83% and 11% (g HBD25/g substrate), respectively. Importantly, HBD25 yield was decreased by increasing salt (NaCl) concentration. Bachelor of Engineering (Chemical and Biomolecular Engineering) 2010-06-04T06:57:00Z 2010-06-04T06:57:00Z 2010 2010 Final Year Project (FYP) http://hdl.handle.net/10356/39819 en Nanyang Technological University 47 p. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic DRNTU::Engineering::Chemical engineering::Biotechnological production
spellingShingle DRNTU::Engineering::Chemical engineering::Biotechnological production
Yaohari, Hazarki.
Optimization of tobacco etch virus (TEV) protease cleavage in fusion proteins.
description This report summarizes the study of tobacco etch virus protease (TEVp) cleavage efficiency to enhance the productivity of antimicrobial peptide human beta-defensin (HBD) 25, a promising new class of antibiotics. Four parameters were investigated: salt concentration, substrate to enzyme ratio, cleavage time and pH. To avoid antimicrobial activity towards the host, the HBD 25 was expressed as a soluble fusion with maltose-binding protein (MBP) in Escherichia coli. Luria-Bertani (LB) was used as the culture medium for E. coli BL21 (DE3). The MBP-HBD25 fusion protein was then cleaved by the TEVp digestion enzyme at room temperature (25°C) in various conditions. The highest yield of HBD25 target peptide was obtained after 6 h of cleavage when 50 mM Tris-HCl, 2 M urea (pH = 8) digestion buffer was used, with 5:1 substrate to enzyme weight ratio. An HBD25 concentration of 0.032 g/l in the cleavage product solution was achieved with the mentioned cleavage condition. The cleavage recovery and yield were 83% and 11% (g HBD25/g substrate), respectively. Importantly, HBD25 yield was decreased by increasing salt (NaCl) concentration.
author2 Susanna Leong Su Jan
author_facet Susanna Leong Su Jan
Yaohari, Hazarki.
format Final Year Project
author Yaohari, Hazarki.
author_sort Yaohari, Hazarki.
title Optimization of tobacco etch virus (TEV) protease cleavage in fusion proteins.
title_short Optimization of tobacco etch virus (TEV) protease cleavage in fusion proteins.
title_full Optimization of tobacco etch virus (TEV) protease cleavage in fusion proteins.
title_fullStr Optimization of tobacco etch virus (TEV) protease cleavage in fusion proteins.
title_full_unstemmed Optimization of tobacco etch virus (TEV) protease cleavage in fusion proteins.
title_sort optimization of tobacco etch virus (tev) protease cleavage in fusion proteins.
publishDate 2010
url http://hdl.handle.net/10356/39819
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