Genome engineering of Toxoplasma gondii using CRISPR/Cas system

Toxoplasma gondii is a protozoan parasite belonging to the phylum Apicomplexa. Behavioural change from aversion to attraction towards cat odour have been observed in Toxoplasma gondii infected rodents. Anti-psychotic drugs haloperidol and valproic acid as well as dopamine intake inhibitor GBR12909 w...

Full description

Saved in:
Bibliographic Details
Main Author: Muhammad Hanif Zaini
Other Authors: Ajai Vyas
Format: Final Year Project
Language:English
Published: 2015
Subjects:
Online Access:http://hdl.handle.net/10356/63633
Tags: Add Tag
No Tags, Be the first to tag this record!
Institution: Nanyang Technological University
Language: English
id sg-ntu-dr.10356-63633
record_format dspace
spelling sg-ntu-dr.10356-636332023-02-28T18:04:34Z Genome engineering of Toxoplasma gondii using CRISPR/Cas system Muhammad Hanif Zaini Ajai Vyas School of Biological Sciences DRNTU::Science::Biological sciences Toxoplasma gondii is a protozoan parasite belonging to the phylum Apicomplexa. Behavioural change from aversion to attraction towards cat odour have been observed in Toxoplasma gondii infected rodents. Anti-psychotic drugs haloperidol and valproic acid as well as dopamine intake inhibitor GBR12909 were observed to rescue this behavioural change in Toxoplasma gondii infected rodents. Thus alterations in dopamine biosynthesis pathway have been proposed as the underlying mechanism behind these behavioural modifications due to the parasite-encoded tyrosine hydroxylase genes, TgAAH1 and TgAAH2. Tyrosine hydroxylase is the rate limiting enzyme in dopamine biosynthesis and responsible for the production of dopamine’s precursor, L-DOPA. Therefore we intend to generate mutant Toxoplasma gondii by knocking out TgAAH1 and TgAAH2 genes using CRISPR/Cas system. CRISPR/Cas plasmid, pU6-Protospacer-1, targeting the N-termini sequence of TgAAH1 and TgAAH2 genes was successfully constructed. In addition, the plasmid was also successfully transfected into Toxoplasma gondii using PEI transfection. Efficacy of pU6-Protospacer-1 in introducing insertions or deletions of nucleotides (indels) into the target site by NHEJ have yet to be determined as experiments are still underway in isolating and subsequent sequencing of single clones of transfected Toxoplasma parasites. Bachelor of Science in Biological Sciences 2015-05-18T02:44:19Z 2015-05-18T02:44:19Z 2015 2015 Final Year Project (FYP) http://hdl.handle.net/10356/63633 en Nanyang Technological University 36 p. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic DRNTU::Science::Biological sciences
spellingShingle DRNTU::Science::Biological sciences
Muhammad Hanif Zaini
Genome engineering of Toxoplasma gondii using CRISPR/Cas system
description Toxoplasma gondii is a protozoan parasite belonging to the phylum Apicomplexa. Behavioural change from aversion to attraction towards cat odour have been observed in Toxoplasma gondii infected rodents. Anti-psychotic drugs haloperidol and valproic acid as well as dopamine intake inhibitor GBR12909 were observed to rescue this behavioural change in Toxoplasma gondii infected rodents. Thus alterations in dopamine biosynthesis pathway have been proposed as the underlying mechanism behind these behavioural modifications due to the parasite-encoded tyrosine hydroxylase genes, TgAAH1 and TgAAH2. Tyrosine hydroxylase is the rate limiting enzyme in dopamine biosynthesis and responsible for the production of dopamine’s precursor, L-DOPA. Therefore we intend to generate mutant Toxoplasma gondii by knocking out TgAAH1 and TgAAH2 genes using CRISPR/Cas system. CRISPR/Cas plasmid, pU6-Protospacer-1, targeting the N-termini sequence of TgAAH1 and TgAAH2 genes was successfully constructed. In addition, the plasmid was also successfully transfected into Toxoplasma gondii using PEI transfection. Efficacy of pU6-Protospacer-1 in introducing insertions or deletions of nucleotides (indels) into the target site by NHEJ have yet to be determined as experiments are still underway in isolating and subsequent sequencing of single clones of transfected Toxoplasma parasites.
author2 Ajai Vyas
author_facet Ajai Vyas
Muhammad Hanif Zaini
format Final Year Project
author Muhammad Hanif Zaini
author_sort Muhammad Hanif Zaini
title Genome engineering of Toxoplasma gondii using CRISPR/Cas system
title_short Genome engineering of Toxoplasma gondii using CRISPR/Cas system
title_full Genome engineering of Toxoplasma gondii using CRISPR/Cas system
title_fullStr Genome engineering of Toxoplasma gondii using CRISPR/Cas system
title_full_unstemmed Genome engineering of Toxoplasma gondii using CRISPR/Cas system
title_sort genome engineering of toxoplasma gondii using crispr/cas system
publishDate 2015
url http://hdl.handle.net/10356/63633
_version_ 1759855296308576256