Amino acids stimulate the endosome-to-golgi trafficking through ragulator and small GTPase Arl5

The endosome-to-Golgi trafficking pathway is an important post-Golgi recycling route. However, there is a lack of knowledge about the regulatory mechanisms behind intracellular membrane trafficking processes in response to extracellular signals. In this study, we found that nutrient starvation rever...

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Main Author: Chen, Bing
Other Authors: Lu Lei
Format: Theses and Dissertations
Language:English
Published: 2018
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Online Access:http://hdl.handle.net/10356/73545
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spelling sg-ntu-dr.10356-735452023-02-28T18:36:05Z Amino acids stimulate the endosome-to-golgi trafficking through ragulator and small GTPase Arl5 Chen, Bing Lu Lei School of Biological Sciences DRNTU::Science::Biological sciences The endosome-to-Golgi trafficking pathway is an important post-Golgi recycling route. However, there is a lack of knowledge about the regulatory mechanisms behind intracellular membrane trafficking processes in response to extracellular signals. In this study, we found that nutrient starvation reversibly caused the trans-Golgi network (TGN) membrane proteins, such as furin and CI-M6PR, translocate from the TGN to the endosomal pool. Using a series of CD8a tagged TGN membrane proteins as reporters, we demonstrated that nutrient could stimulate the endosome-to-Golgi trafficking. We found that amino acids (AAs), especially glutamine, but not growth factors or glucose, were the key factors regulating the endosome-to-Golgi trafficking in mammalian cells. Moreover, the stimulation effect of AAs on endosome-to-Golgi trafficking is probably ubiquitous, as it is observed in multiple cell lines. Thus, we made a novel discovery that the endosome-to-Golgi trafficking of cargos is inhibited and stimulated by the absence and presence, respectively, of AAs. Inspired by the mechanism of the AA-induced mTORC1 activation pathway, we hypothesized that the AA-stimulated endosome-to-Golgi trafficking pathway might share similar machinery. By selectively inhibiting or depleting each component of the AA-stimulated mTORC1 signaling pathway, it was revealed that SLC38A9, v-ATPase and Ragulator, but not Rag GTPases or mTORC1, are essential for AA-stimulated endosome-to-Golgi trafficking. To accomplish the delivery of cargos from endosomes to the Golgi, various factors, including tethering factors, SNAREs and the small GTPases from the Rab and Arf-like family, are involved. Arl5, an Arf-like family small GTPases, has been found to regulate the membrane trafficking between the endosome and the Golgi. There are three closely related paralogs of Arl5 in vertebrates – Arl5a, b and c, where Arl5a, Arl5b are the dominant ones. Endogenously and exogenously expressed Arl5a and Arl5b were found to localize in the Golgi, while human Arl5c did not display a Golgi localization. Using yeast two-hybrid, pull-down and immunoprecipitation assays, we found that Arl5 interacts with Lamtor1. Live-cell imaging revealed that Arl5b colocalizes with Lamtor1 at the endosome and lysosome. Furthermore, both Arl5 and its effector, the Golgi-associated retrograde protein complex (GARP), are required for AA-stimulated trafficking. We have therefore identified a mechanistic connection between nutrient signaling and the endosome-to-Golgi trafficking pathway, whereby SLC38A9 and v-ATPase sense AA-sufficiency. Moreover, the interaction between Lamtor1 and Arl5 might activate Arl5, which, together with its effector GARP, a tethering factor, likely facilitates the endosome-to-Golgi trafficking. ​Doctor of Philosophy (SBS) 2018-03-29T03:34:07Z 2018-03-29T03:34:07Z 2018 Thesis Chen, B. (2018). Amino acids stimulate the endosome-to-golgi trafficking through ragulator and small GTPase Arl5. Doctoral thesis, Nanyang Technological University, Singapore. http://hdl.handle.net/10356/73545 10.32657/10356/73545 en 149 p. application/pdf
institution Nanyang Technological University
building NTU Library
continent Asia
country Singapore
Singapore
content_provider NTU Library
collection DR-NTU
language English
topic DRNTU::Science::Biological sciences
spellingShingle DRNTU::Science::Biological sciences
Chen, Bing
Amino acids stimulate the endosome-to-golgi trafficking through ragulator and small GTPase Arl5
description The endosome-to-Golgi trafficking pathway is an important post-Golgi recycling route. However, there is a lack of knowledge about the regulatory mechanisms behind intracellular membrane trafficking processes in response to extracellular signals. In this study, we found that nutrient starvation reversibly caused the trans-Golgi network (TGN) membrane proteins, such as furin and CI-M6PR, translocate from the TGN to the endosomal pool. Using a series of CD8a tagged TGN membrane proteins as reporters, we demonstrated that nutrient could stimulate the endosome-to-Golgi trafficking. We found that amino acids (AAs), especially glutamine, but not growth factors or glucose, were the key factors regulating the endosome-to-Golgi trafficking in mammalian cells. Moreover, the stimulation effect of AAs on endosome-to-Golgi trafficking is probably ubiquitous, as it is observed in multiple cell lines. Thus, we made a novel discovery that the endosome-to-Golgi trafficking of cargos is inhibited and stimulated by the absence and presence, respectively, of AAs. Inspired by the mechanism of the AA-induced mTORC1 activation pathway, we hypothesized that the AA-stimulated endosome-to-Golgi trafficking pathway might share similar machinery. By selectively inhibiting or depleting each component of the AA-stimulated mTORC1 signaling pathway, it was revealed that SLC38A9, v-ATPase and Ragulator, but not Rag GTPases or mTORC1, are essential for AA-stimulated endosome-to-Golgi trafficking. To accomplish the delivery of cargos from endosomes to the Golgi, various factors, including tethering factors, SNAREs and the small GTPases from the Rab and Arf-like family, are involved. Arl5, an Arf-like family small GTPases, has been found to regulate the membrane trafficking between the endosome and the Golgi. There are three closely related paralogs of Arl5 in vertebrates – Arl5a, b and c, where Arl5a, Arl5b are the dominant ones. Endogenously and exogenously expressed Arl5a and Arl5b were found to localize in the Golgi, while human Arl5c did not display a Golgi localization. Using yeast two-hybrid, pull-down and immunoprecipitation assays, we found that Arl5 interacts with Lamtor1. Live-cell imaging revealed that Arl5b colocalizes with Lamtor1 at the endosome and lysosome. Furthermore, both Arl5 and its effector, the Golgi-associated retrograde protein complex (GARP), are required for AA-stimulated trafficking. We have therefore identified a mechanistic connection between nutrient signaling and the endosome-to-Golgi trafficking pathway, whereby SLC38A9 and v-ATPase sense AA-sufficiency. Moreover, the interaction between Lamtor1 and Arl5 might activate Arl5, which, together with its effector GARP, a tethering factor, likely facilitates the endosome-to-Golgi trafficking.
author2 Lu Lei
author_facet Lu Lei
Chen, Bing
format Theses and Dissertations
author Chen, Bing
author_sort Chen, Bing
title Amino acids stimulate the endosome-to-golgi trafficking through ragulator and small GTPase Arl5
title_short Amino acids stimulate the endosome-to-golgi trafficking through ragulator and small GTPase Arl5
title_full Amino acids stimulate the endosome-to-golgi trafficking through ragulator and small GTPase Arl5
title_fullStr Amino acids stimulate the endosome-to-golgi trafficking through ragulator and small GTPase Arl5
title_full_unstemmed Amino acids stimulate the endosome-to-golgi trafficking through ragulator and small GTPase Arl5
title_sort amino acids stimulate the endosome-to-golgi trafficking through ragulator and small gtpase arl5
publishDate 2018
url http://hdl.handle.net/10356/73545
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