A hybrid short read mapping accelerator

• Main Authors: Chen, Yupeng, Schmidt, Bertil, Maskell, Douglas Leslie
• 其他作者: School of Computer Engineering
• 格式: Article
• 語言: English
• 出版: 2013
• 主題: DRNTU::Engineering::Computer science and engineering
• 在線閱讀: https://hdl.handle.net/10356/79483; http://hdl.handle.net/10220/10983

Background The rapid growth of short read datasets poses a new challenge to the short read mapping problem in terms of sensitivity and execution speed. Existing methods often use a restrictive error model for computing the alignments to improve speed, whereas more flexible error models are generall...