Composite mathematical modeling of calcium signaling behind neuronal cell death in Alzheimer’s disease

Background: Alzheimer’s disease (AD) is a progressive neurological disorder, recognized as the most common cause of dementia affecting people aged 65 and above. AD is characterized by an increase in amyloid metabolism, and by the misfolding and deposition of β-amyloid oligomers in and around neurons...

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Main Authors: Ranjan, Bobby, Chong, Ket Hing, Zheng, Jie
Other Authors: School of Computer Science and Engineering
Format: Article
Language:English
Published: 2018
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Online Access:https://hdl.handle.net/10356/86094
http://hdl.handle.net/10220/45259
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Institution: Nanyang Technological University
Language: English
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spelling sg-ntu-dr.10356-860942020-03-07T11:49:01Z Composite mathematical modeling of calcium signaling behind neuronal cell death in Alzheimer’s disease Ranjan, Bobby Chong, Ket Hing Zheng, Jie School of Computer Science and Engineering Complexity Institute Biomedical Informatics Lab Calcium Signaling Neuronal Cell Death Background: Alzheimer’s disease (AD) is a progressive neurological disorder, recognized as the most common cause of dementia affecting people aged 65 and above. AD is characterized by an increase in amyloid metabolism, and by the misfolding and deposition of β-amyloid oligomers in and around neurons in the brain. These processes remodel the calcium signaling mechanism in neurons, leading to cell death via apoptosis. Despite accumulating knowledge about the biological processes underlying AD, mathematical models to date are restricted to depicting only a small portion of the pathology. Results: Here, we integrated multiple mathematical models to analyze and understand the relationship among amyloid depositions, calcium signaling and mitochondrial permeability transition pore (PTP) related cell apoptosis in AD. The model was used to simulate calcium dynamics in the absence and presence of AD. In the absence of AD, i.e. without β-amyloid deposition, mitochondrial and cytosolic calcium level remains in the low resting concentration. However, our in silico simulation of the presence of AD with the β-amyloid deposition, shows an increase in the entry of calcium ions into the cell and dysregulation of Ca 2+ channel receptors on the Endoplasmic Reticulum. This composite model enabled us to make simulation that is not possible to measure experimentally. Conclusions: Our mathematical model depicting the mechanisms affecting calcium signaling in neurons can help understand AD at the systems level and has potential for diagnostic and therapeutic applications. MOE (Min. of Education, S’pore) Published version 2018-07-26T07:40:08Z 2019-12-06T16:15:53Z 2018-07-26T07:40:08Z 2019-12-06T16:15:53Z 2018 Journal Article Ranjan, B., Chong, K. H., & Zheng, J. (2018). Composite mathematical modeling of calcium signaling behind neuronal cell death in Alzheimer’s disease. BMC Systems Biology, 12(S1), 10-. https://hdl.handle.net/10356/86094 http://hdl.handle.net/10220/45259 10.1186/s12918-018-0529-2 en BMC Systems Biology © 2018 The Author(s). Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. 14 p. application/pdf
institution Nanyang Technological University
building NTU Library
country Singapore
collection DR-NTU
language English
topic Calcium Signaling
Neuronal Cell Death
spellingShingle Calcium Signaling
Neuronal Cell Death
Ranjan, Bobby
Chong, Ket Hing
Zheng, Jie
Composite mathematical modeling of calcium signaling behind neuronal cell death in Alzheimer’s disease
description Background: Alzheimer’s disease (AD) is a progressive neurological disorder, recognized as the most common cause of dementia affecting people aged 65 and above. AD is characterized by an increase in amyloid metabolism, and by the misfolding and deposition of β-amyloid oligomers in and around neurons in the brain. These processes remodel the calcium signaling mechanism in neurons, leading to cell death via apoptosis. Despite accumulating knowledge about the biological processes underlying AD, mathematical models to date are restricted to depicting only a small portion of the pathology. Results: Here, we integrated multiple mathematical models to analyze and understand the relationship among amyloid depositions, calcium signaling and mitochondrial permeability transition pore (PTP) related cell apoptosis in AD. The model was used to simulate calcium dynamics in the absence and presence of AD. In the absence of AD, i.e. without β-amyloid deposition, mitochondrial and cytosolic calcium level remains in the low resting concentration. However, our in silico simulation of the presence of AD with the β-amyloid deposition, shows an increase in the entry of calcium ions into the cell and dysregulation of Ca 2+ channel receptors on the Endoplasmic Reticulum. This composite model enabled us to make simulation that is not possible to measure experimentally. Conclusions: Our mathematical model depicting the mechanisms affecting calcium signaling in neurons can help understand AD at the systems level and has potential for diagnostic and therapeutic applications.
author2 School of Computer Science and Engineering
author_facet School of Computer Science and Engineering
Ranjan, Bobby
Chong, Ket Hing
Zheng, Jie
format Article
author Ranjan, Bobby
Chong, Ket Hing
Zheng, Jie
author_sort Ranjan, Bobby
title Composite mathematical modeling of calcium signaling behind neuronal cell death in Alzheimer’s disease
title_short Composite mathematical modeling of calcium signaling behind neuronal cell death in Alzheimer’s disease
title_full Composite mathematical modeling of calcium signaling behind neuronal cell death in Alzheimer’s disease
title_fullStr Composite mathematical modeling of calcium signaling behind neuronal cell death in Alzheimer’s disease
title_full_unstemmed Composite mathematical modeling of calcium signaling behind neuronal cell death in Alzheimer’s disease
title_sort composite mathematical modeling of calcium signaling behind neuronal cell death in alzheimer’s disease
publishDate 2018
url https://hdl.handle.net/10356/86094
http://hdl.handle.net/10220/45259
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