Chemical isotope labeling exposome (CIL-EXPOSOME) : one high-throughput platform for human urinary global exposome characterization

Human exposure to hundreds of chemicals, a primary component of the exposome, has been associated with many diseases. Urinary biomarkers of these chemicals are commonly monitored to quantify their exposure. However, because of low concentrations and the great variability in physicochemical properti...

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Main Authors: Jia, Shenglan, Xu, Tengfei, Huan, Tao, Chong, Maria, Liu, Min, Fang, Wenjuan, Fang, Mingliang
Other Authors: School of Civil and Environmental Engineering
Format: Article
Language:English
Published: 2019
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Online Access:https://hdl.handle.net/10356/89735
http://hdl.handle.net/10220/48841
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Institution: Nanyang Technological University
Language: English
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spelling sg-ntu-dr.10356-897352020-09-26T21:58:13Z Chemical isotope labeling exposome (CIL-EXPOSOME) : one high-throughput platform for human urinary global exposome characterization Jia, Shenglan Xu, Tengfei Huan, Tao Chong, Maria Liu, Min Fang, Wenjuan Fang, Mingliang School of Civil and Environmental Engineering Nanyang Environment and Water Research Institute Exposome DRNTU::Science::Chemistry Chemical Isotope Human exposure to hundreds of chemicals, a primary component of the exposome, has been associated with many diseases. Urinary biomarkers of these chemicals are commonly monitored to quantify their exposure. However, because of low concentrations and the great variability in physicochemical properties of exposure biomarkers, exposome research has been limited by low-throughput and costly methods. Here, we developed a sensitive and high-throughput exposome analytical platform (CIL-EXPOSOME) by isotopically labeling urinary biomarkers with common functional groups (phenolic hydroxyl/carboxyl/primary amine). After a simple cleanup, we used mass spectrometry to perform a screening for both targeted and untargeted biomarkers, which was further processed by an automatic computational pipeline method for qualification and quantification. This platform has effectively introduced an isotope tag for the absolute quantification of biomarkers and has improved sensitivity of 2−1184 fold compared to existing methods. For putative identification, we built a database of 818 urinary biomarkers with MS/MS fragmentation information from either standards or in silico predictions. Using this platform, we have found 671 urinary exposure biomarker candidates from a 2 mL pooled urine sample. The exposome data acquisition and analysis time has also been greatly shortened. The results showed that CILEXPOSOME is a useful tool for global exposome analysis of complex samples. MOE (Min. of Education, S’pore) Accepted version 2019-06-19T08:37:00Z 2019-12-06T17:32:15Z 2019-06-19T08:37:00Z 2019-12-06T17:32:15Z 2019 2019 Journal Article Jia, S., Xu, T., Huan, T., Chong, M., Liu, M., Fang, W., & Fang, M. (2019). Chemical isotope labeling exposome (CIL-EXPOSOME) : one high-throughput platform for human urinary global exposome characterization. Environmental Science & Technology, 53(9), 5445-5453. doi:10.1021/acs.est.9b00285 https://hdl.handle.net/10356/89735 http://hdl.handle.net/10220/48841 10.1021/acs.est.9b00285 212119 en Environmental Science & Technology This document is the Accepted Manuscript version of a Published Work that appeared in final form in Environmental Science & Technology, copyright © American Chemical Society after peer review and technical editing by the publisher. To access the final edited and published work see https://doi.org/10.1021/acs.est.9b00285 9 p. application/pdf
institution Nanyang Technological University
building NTU Library
country Singapore
collection DR-NTU
language English
topic Exposome
DRNTU::Science::Chemistry
Chemical Isotope
spellingShingle Exposome
DRNTU::Science::Chemistry
Chemical Isotope
Jia, Shenglan
Xu, Tengfei
Huan, Tao
Chong, Maria
Liu, Min
Fang, Wenjuan
Fang, Mingliang
Chemical isotope labeling exposome (CIL-EXPOSOME) : one high-throughput platform for human urinary global exposome characterization
description Human exposure to hundreds of chemicals, a primary component of the exposome, has been associated with many diseases. Urinary biomarkers of these chemicals are commonly monitored to quantify their exposure. However, because of low concentrations and the great variability in physicochemical properties of exposure biomarkers, exposome research has been limited by low-throughput and costly methods. Here, we developed a sensitive and high-throughput exposome analytical platform (CIL-EXPOSOME) by isotopically labeling urinary biomarkers with common functional groups (phenolic hydroxyl/carboxyl/primary amine). After a simple cleanup, we used mass spectrometry to perform a screening for both targeted and untargeted biomarkers, which was further processed by an automatic computational pipeline method for qualification and quantification. This platform has effectively introduced an isotope tag for the absolute quantification of biomarkers and has improved sensitivity of 2−1184 fold compared to existing methods. For putative identification, we built a database of 818 urinary biomarkers with MS/MS fragmentation information from either standards or in silico predictions. Using this platform, we have found 671 urinary exposure biomarker candidates from a 2 mL pooled urine sample. The exposome data acquisition and analysis time has also been greatly shortened. The results showed that CILEXPOSOME is a useful tool for global exposome analysis of complex samples.
author2 School of Civil and Environmental Engineering
author_facet School of Civil and Environmental Engineering
Jia, Shenglan
Xu, Tengfei
Huan, Tao
Chong, Maria
Liu, Min
Fang, Wenjuan
Fang, Mingliang
format Article
author Jia, Shenglan
Xu, Tengfei
Huan, Tao
Chong, Maria
Liu, Min
Fang, Wenjuan
Fang, Mingliang
author_sort Jia, Shenglan
title Chemical isotope labeling exposome (CIL-EXPOSOME) : one high-throughput platform for human urinary global exposome characterization
title_short Chemical isotope labeling exposome (CIL-EXPOSOME) : one high-throughput platform for human urinary global exposome characterization
title_full Chemical isotope labeling exposome (CIL-EXPOSOME) : one high-throughput platform for human urinary global exposome characterization
title_fullStr Chemical isotope labeling exposome (CIL-EXPOSOME) : one high-throughput platform for human urinary global exposome characterization
title_full_unstemmed Chemical isotope labeling exposome (CIL-EXPOSOME) : one high-throughput platform for human urinary global exposome characterization
title_sort chemical isotope labeling exposome (cil-exposome) : one high-throughput platform for human urinary global exposome characterization
publishDate 2019
url https://hdl.handle.net/10356/89735
http://hdl.handle.net/10220/48841
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