Combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition
Bacterial biofilms are imaged by various kinds of microscopy including confocal laser scanning microscopy (CLSM) and scanning electron microscopy (SEM). One limitation of CLSM is its restricted magnification, which is resolved by the use of SEM that provides high-magnification spatial images of how...
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sg-ntu-dr.10356-985862020-03-07T12:47:10Z Combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition Alhede, Morten Qvortrup, Klaus Liebrechts, Ramon Høiby, Niels Givskov, Michael Bjarnsholt, Thomas DRNTU::Engineering::Bioengineering Bacterial biofilms are imaged by various kinds of microscopy including confocal laser scanning microscopy (CLSM) and scanning electron microscopy (SEM). One limitation of CLSM is its restricted magnification, which is resolved by the use of SEM that provides high-magnification spatial images of how the single bacteria are located and interact within the biofilm. However, conventional SEM is limited by the requirement of dehydration of the samples during preparation. As biofilms consist mainly of water, the specimen dehydration might alter its morphology. High magnification yet authentic images are important to understand the physiology of biofilms. We compared conventional SEM, Focused Ion Beam (FIB)-SEM and CLSM with SEM techniques [cryo-SEM and environmental-SEM (ESEM)] that do not require dehydration. In the case of cryo-SEM, the biofilm is not dehydrated but kept frozen to obtain high-magnification images closer to the native state of the sample. Using the ESEM technique, no preparation is needed. Applying these methods to biofilms of Pseudomonas aeruginosa showed us that the dehydration of biofilms substantially influences its appearance and that a more authentic biofilm image emerges when combining all methods. 2013-10-04T03:28:12Z 2019-12-06T19:57:08Z 2013-10-04T03:28:12Z 2019-12-06T19:57:08Z 2012 2012 Journal Article Alhede, M., Qvortrup, K., Liebrechts, R., Høiby, N., Givskov, M., & Bjarnsholt, T. (2012). Combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition. FEMS immunology & medical microbiology, 65(2), 335-342. https://hdl.handle.net/10356/98586 http://hdl.handle.net/10220/16252 10.1111/j.1574-695X.2012.00956.x en FEMS immunology & medical microbiology |
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DRNTU::Engineering::Bioengineering Alhede, Morten Qvortrup, Klaus Liebrechts, Ramon Høiby, Niels Givskov, Michael Bjarnsholt, Thomas Combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition |
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Bacterial biofilms are imaged by various kinds of microscopy including confocal laser scanning microscopy (CLSM) and scanning electron microscopy (SEM). One limitation of CLSM is its restricted magnification, which is resolved by the use of SEM that provides high-magnification spatial images of how the single bacteria are located and interact within the biofilm. However, conventional SEM is limited by the requirement of dehydration of the samples during preparation. As biofilms consist mainly of water, the specimen dehydration might alter its morphology. High magnification yet authentic images are important to understand the physiology of biofilms. We compared conventional SEM, Focused Ion Beam (FIB)-SEM and CLSM with SEM techniques [cryo-SEM and environmental-SEM (ESEM)] that do not require dehydration. In the case of cryo-SEM, the biofilm is not dehydrated but kept frozen to obtain high-magnification images closer to the native state of the sample. Using the ESEM technique, no preparation is needed. Applying these methods to biofilms of Pseudomonas aeruginosa showed us that the dehydration of biofilms substantially influences its appearance and that a more authentic biofilm image emerges when combining all methods. |
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Article |
author |
Alhede, Morten Qvortrup, Klaus Liebrechts, Ramon Høiby, Niels Givskov, Michael Bjarnsholt, Thomas |
author_facet |
Alhede, Morten Qvortrup, Klaus Liebrechts, Ramon Høiby, Niels Givskov, Michael Bjarnsholt, Thomas |
author_sort |
Alhede, Morten |
title |
Combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition |
title_short |
Combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition |
title_full |
Combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition |
title_fullStr |
Combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition |
title_full_unstemmed |
Combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition |
title_sort |
combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition |
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2013 |
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https://hdl.handle.net/10356/98586 http://hdl.handle.net/10220/16252 |
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