Combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition

Bacterial biofilms are imaged by various kinds of microscopy including confocal laser scanning microscopy (CLSM) and scanning electron microscopy (SEM). One limitation of CLSM is its restricted magnification, which is resolved by the use of SEM that provides high-magnification spatial images of how...

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Main Authors: Alhede, Morten, Qvortrup, Klaus, Liebrechts, Ramon, Høiby, Niels, Givskov, Michael, Bjarnsholt, Thomas
Format: Article
Language:English
Published: 2013
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Online Access:https://hdl.handle.net/10356/98586
http://hdl.handle.net/10220/16252
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Institution: Nanyang Technological University
Language: English
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spelling sg-ntu-dr.10356-985862020-03-07T12:47:10Z Combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition Alhede, Morten Qvortrup, Klaus Liebrechts, Ramon Høiby, Niels Givskov, Michael Bjarnsholt, Thomas DRNTU::Engineering::Bioengineering Bacterial biofilms are imaged by various kinds of microscopy including confocal laser scanning microscopy (CLSM) and scanning electron microscopy (SEM). One limitation of CLSM is its restricted magnification, which is resolved by the use of SEM that provides high-magnification spatial images of how the single bacteria are located and interact within the biofilm. However, conventional SEM is limited by the requirement of dehydration of the samples during preparation. As biofilms consist mainly of water, the specimen dehydration might alter its morphology. High magnification yet authentic images are important to understand the physiology of biofilms. We compared conventional SEM, Focused Ion Beam (FIB)-SEM and CLSM with SEM techniques [cryo-SEM and environmental-SEM (ESEM)] that do not require dehydration. In the case of cryo-SEM, the biofilm is not dehydrated but kept frozen to obtain high-magnification images closer to the native state of the sample. Using the ESEM technique, no preparation is needed. Applying these methods to biofilms of Pseudomonas aeruginosa showed us that the dehydration of biofilms substantially influences its appearance and that a more authentic biofilm image emerges when combining all methods. 2013-10-04T03:28:12Z 2019-12-06T19:57:08Z 2013-10-04T03:28:12Z 2019-12-06T19:57:08Z 2012 2012 Journal Article Alhede, M., Qvortrup, K., Liebrechts, R., Høiby, N., Givskov, M., & Bjarnsholt, T. (2012). Combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition. FEMS immunology & medical microbiology, 65(2), 335-342. https://hdl.handle.net/10356/98586 http://hdl.handle.net/10220/16252 10.1111/j.1574-695X.2012.00956.x en FEMS immunology & medical microbiology
institution Nanyang Technological University
building NTU Library
country Singapore
collection DR-NTU
language English
topic DRNTU::Engineering::Bioengineering
spellingShingle DRNTU::Engineering::Bioengineering
Alhede, Morten
Qvortrup, Klaus
Liebrechts, Ramon
Høiby, Niels
Givskov, Michael
Bjarnsholt, Thomas
Combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition
description Bacterial biofilms are imaged by various kinds of microscopy including confocal laser scanning microscopy (CLSM) and scanning electron microscopy (SEM). One limitation of CLSM is its restricted magnification, which is resolved by the use of SEM that provides high-magnification spatial images of how the single bacteria are located and interact within the biofilm. However, conventional SEM is limited by the requirement of dehydration of the samples during preparation. As biofilms consist mainly of water, the specimen dehydration might alter its morphology. High magnification yet authentic images are important to understand the physiology of biofilms. We compared conventional SEM, Focused Ion Beam (FIB)-SEM and CLSM with SEM techniques [cryo-SEM and environmental-SEM (ESEM)] that do not require dehydration. In the case of cryo-SEM, the biofilm is not dehydrated but kept frozen to obtain high-magnification images closer to the native state of the sample. Using the ESEM technique, no preparation is needed. Applying these methods to biofilms of Pseudomonas aeruginosa showed us that the dehydration of biofilms substantially influences its appearance and that a more authentic biofilm image emerges when combining all methods.
format Article
author Alhede, Morten
Qvortrup, Klaus
Liebrechts, Ramon
Høiby, Niels
Givskov, Michael
Bjarnsholt, Thomas
author_facet Alhede, Morten
Qvortrup, Klaus
Liebrechts, Ramon
Høiby, Niels
Givskov, Michael
Bjarnsholt, Thomas
author_sort Alhede, Morten
title Combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition
title_short Combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition
title_full Combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition
title_fullStr Combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition
title_full_unstemmed Combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition
title_sort combination of microscopic techniques reveals a comprehensive visual impression of biofilm structure and composition
publishDate 2013
url https://hdl.handle.net/10356/98586
http://hdl.handle.net/10220/16252
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