Computational detection of protein complexes in AP-MS experiments

Computational detection of protein complexes in AP-MS experiments

10.1002/pmic.201100508

Saved in:

Bibliographic Details
Main Author:	Choi, H.
Other Authors:	SAW SWEE HOCK SCHOOL OF PUBLIC HEALTH
Format:	Review
Published:	2014
Subjects:	Bioinformatics Interaction profiling Protein-protein complexes Systems biology
Online Access:	http://scholarbank.nus.edu.sg/handle/10635/109110
Tags:	Add Tag No Tags, Be the first to tag this record!
Institution:	National University of Singapore

Similar Items

Discovering Dynamic Protein Complexes from Static Interacomes: Three Challenges
by: YONG CHERN HAN
Published: (2015)

A survey of computational methods for protein complex prediction from protein interaction networks
by: Srihari, S., et al.
Published: (2013)

Computational Methods for Identifying Conserved Protein Complexes between Species from Protein Interaction Data
by: NGUYEN PHI VU
Published: (2013)

Detecting temporal protein complexes from dynamic protein-protein interaction networks
by: Ou-Yang, L, et al.
Published: (2020)

PROTREC: a probability-based approach for recovering missing proteins based on biological networks
by: Kong, Weijia, et al.
Published: (2022)

Using indirect protein-protein interactions for protein complex prediction
by: Chua, H.N., et al.
Published: (2013)

Employing functional interactions for characterisation and detection of sparse complexes from yeast PPI networks
by: Srihari, S., et al.
Published: (2013)

Computational approaches for detecting protein complexes from protein interaction networks: A survey
by: Li, X, et al.
Published: (2020)

SAINT-MS1: Protein-protein interaction scoring using label-free intensity data in affinity purification-mass spectrometry experiments
by: Choi, H., et al.
Published: (2014)

A core-attachment based method to detect protein complexes in PPI networks
by: Wu, M, et al.
Published: (2020)

Integrating biological insights with topological characteristics for improved complex prediction from protein interaction networks
by: SRIGANESH MANIGANAHALLI SRIHARI
Published: (2012)

PREDICTIVE MODELS TO DISCOVER NOVEL RNA-BINDING PROTEINS
by: JIN WENHAO
Published: (2018)

PCalign: A method to quantify physicochemical similarity of protein-protein interfaces
by: Cheng, S, et al.
Published: (2020)

Inferring Gene-Phenotype associations via global protein complex network propagation
by: Yang P., et al.
Published: (2019)

Automated linear motif discovery from protein interaction network
by: TAN SOON HENG
Published: (2010)

Bioinformatics Analysis and Modelling of Therapeutically Relevant Molecules
by: TAO LIN
Published: (2015)

Network-based pipeline for analyzing MS data: An application toward liver cancer
by: Goh, W.W.B., et al.
Published: (2013)

A two-layer integration framework for protein complex detection
by: Ou-Yang, L, et al.
Published: (2020)

Benchmarking Human Protein Complexes to Investigate Drug-Related Systems and Evaluate Predicted Protein Complexes
by: Wu M., et al.
Published: (2019)

Genetic and systematic approaches toward g protein-coupled abiotic stress signaling in plants
by: Wu, T.-Y., et al.
Published: (2021)

Using ProHits to store, annotate, and analyze Affinity purification-mass spectrometry (AP-MS) Data
by: Liu, G., et al.
Published: (2014)

Disruption of protein complexes
by: Taheri, G., et al.
Published: (2014)

Graph - Based Methods for Protein Function Prediction
by: CHUA HON NIAN
Published: (2011)

The Metric Space of Proteins: Comparative Study of Clustering Algorithms
by: SASSON, Ori, et al.
Published: (2002)

Molecular docking studies on the interaction of the Cryptosporidium parvum protein, CpCDPK1, with selected plant compounds
by: Quijano, Rupert C., Jr., et al.
Published: (2024)

Detection of outlier residues for improving interface prediction in protein heterocomplexes
by: Chen, P., et al.
Published: (2013)

Efficient development of stable and highly functionalised peptides targeting the CK2α/CK2β protein–protein interaction
by: Iegre, Jessica, et al.
Published: (2019)

PROTEIN COMPLEX PREDICTION BY DATE HUB REMOVAL
by: IANA PYROGOVA
Published: (2017)

Physical and functional interaction of dengue and host protein
by: Teera Poyomtip
Published: (2023)

Growing functional modules from a seed protein via integration of protein interaction and gene expression data
by: Maraziotis, I.A, et al.
Published: (2020)

Machine learning on protein-protein interaction prediction: models, challenges and trends
by: Tang, Tao, et al.
Published: (2023)

Progress in computational studies of host-pathogen interactions
by: Zhou, H., et al.
Published: (2013)

PPiClust: Effect clustering of 3D protein-protein interaction interfaces
by: Aung, Z., et al.
Published: (2013)

Studying Protein–DNA Complexes Using Gold Nanoparticles by Exploiting Particle Aggregation, Refractive Index Change, and Fluorescence Quenching and Enhancement Principles
by: Sutarlie, Laura, et al.
Published: (2016)

Clustering-based approach for predicting motif pairs from protein interaction data
by: Leung, H.C.-M., et al.
Published: (2013)

Protein function and inhibitor prediction by statistical learning approach
by: HAN LIANYI
Published: (2010)

Discovering interacting domains and motifs in protein-protein interactions
by: Hugo, W., et al.
Published: (2013)

Topological study of human complement terminal complex
by: Nuanthip Kamolvarin
Published: (2023)

Cell-based Profiling of Lipid-Protein Interactions
by: PHUA ZHENG YEN
Published: (2019)

MULTISCALE AND INTEGRATIVE MODELLING OF THE FLAVIVIRUS C PROTEIN AND ITS INTERACTIONS
by: PRISCILLA BOON LI SHAN
Published: (2021)