Alignment and clustering of phylogenetic markers - implications for microbial diversity studies

10.1186/1471-2105-11-152

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Main Authors:	White, J.R, Navlakha, S, Nagarajan, N, Ghodsi, M, Kingsford, C, Pop, M
Other Authors:	MEDICINE
Format:	Article
Published:	2020
Subjects:	Algorithm parameters Bacterial community Critical assessment High-throughput sequencing Microbial diversity Operational taxonomic units Semi-supervised Clustering Taxonomic composition Clustering algorithms RNA Bacteria (microorganisms) Otus bacterial DNA bacterial RNA RNA 16S article cluster analysis genetic marker genetic variability genetics phylogeny sequence alignment Cluster Analysis DNA, Bacterial Genetic Markers Genetic Variation Phylogeny RNA, Bacterial RNA, Ribosomal, 16S Sequence Alignment
Online Access:	https://scholarbank.nus.edu.sg/handle/10635/181675
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Institution:	National University of Singapore

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spelling	sg-nus-scholar.10635-1816752024-04-24T05:48:00Z Alignment and clustering of phylogenetic markers - implications for microbial diversity studies White, J.R Navlakha, S Nagarajan, N Ghodsi, M Kingsford, C Pop, M MEDICINE Algorithm parameters Bacterial community Critical assessment High-throughput sequencing Microbial diversity Operational taxonomic units Semi-supervised Clustering Taxonomic composition Clustering algorithms RNA Bacteria (microorganisms) Otus bacterial DNA bacterial RNA RNA 16S article cluster analysis genetic marker genetic variability genetics phylogeny sequence alignment Cluster Analysis DNA, Bacterial Genetic Markers Genetic Variation Phylogeny RNA, Bacterial RNA, Ribosomal, 16S Sequence Alignment 10.1186/1471-2105-11-152 BMC Bioinformatics 11 152 2020-10-27T11:40:17Z 2020-10-27T11:40:17Z 2010 Article White, J.R, Navlakha, S, Nagarajan, N, Ghodsi, M, Kingsford, C, Pop, M (2010). Alignment and clustering of phylogenetic markers - implications for microbial diversity studies. BMC Bioinformatics 11 : 152. ScholarBank@NUS Repository. https://doi.org/10.1186/1471-2105-11-152 14712105 https://scholarbank.nus.edu.sg/handle/10635/181675 Attribution 4.0 International http://creativecommons.org/licenses/by/4.0/ Unpaywall 20201031
institution	National University of Singapore
building	NUS Library
continent	Asia
country	Singapore Singapore
content_provider	NUS Library
collection	ScholarBank@NUS
topic	Algorithm parameters Bacterial community Critical assessment High-throughput sequencing Microbial diversity Operational taxonomic units Semi-supervised Clustering Taxonomic composition Clustering algorithms RNA Bacteria (microorganisms) Otus bacterial DNA bacterial RNA RNA 16S article cluster analysis genetic marker genetic variability genetics phylogeny sequence alignment Cluster Analysis DNA, Bacterial Genetic Markers Genetic Variation Phylogeny RNA, Bacterial RNA, Ribosomal, 16S Sequence Alignment
spellingShingle	Algorithm parameters Bacterial community Critical assessment High-throughput sequencing Microbial diversity Operational taxonomic units Semi-supervised Clustering Taxonomic composition Clustering algorithms RNA Bacteria (microorganisms) Otus bacterial DNA bacterial RNA RNA 16S article cluster analysis genetic marker genetic variability genetics phylogeny sequence alignment Cluster Analysis DNA, Bacterial Genetic Markers Genetic Variation Phylogeny RNA, Bacterial RNA, Ribosomal, 16S Sequence Alignment White, J.R Navlakha, S Nagarajan, N Ghodsi, M Kingsford, C Pop, M Alignment and clustering of phylogenetic markers - implications for microbial diversity studies
description	10.1186/1471-2105-11-152
author2	MEDICINE
author_facet	MEDICINE White, J.R Navlakha, S Nagarajan, N Ghodsi, M Kingsford, C Pop, M
format	Article
author	White, J.R Navlakha, S Nagarajan, N Ghodsi, M Kingsford, C Pop, M
author_sort	White, J.R
title	Alignment and clustering of phylogenetic markers - implications for microbial diversity studies
title_short	Alignment and clustering of phylogenetic markers - implications for microbial diversity studies
title_full	Alignment and clustering of phylogenetic markers - implications for microbial diversity studies
title_fullStr	Alignment and clustering of phylogenetic markers - implications for microbial diversity studies
title_full_unstemmed	Alignment and clustering of phylogenetic markers - implications for microbial diversity studies
title_sort	alignment and clustering of phylogenetic markers - implications for microbial diversity studies
publishDate	2020
url	https://scholarbank.nus.edu.sg/handle/10635/181675
_version_	1800914648755601408

Alignment and clustering of phylogenetic markers - implications for microbial diversity studies

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